RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SLC10A4Q96EP9 437 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 SNF8Q96H20 258 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 SDCBP2Q9H190 292 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 IFT122Q9HBG6 1241 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 PTPRHQ9HD43 1115 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 DNPEPQ9ULA0 475 aa16.67■□□□□ 0.26
LRFN1-201ENST00000248668 RASGRF2O14827 1237 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 PSTPIP1O43586 416 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 C22orf31O95567 290 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 NUDT17P0C025 328 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 IFNAR2P48551 515 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 PLCB3Q01970 1234 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 KLF1Q13351 362 aaPredicted RBP16.66■□□□□ 0.26
LRFN1-201ENST00000248668 MTM1Q13496 603 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 PTPN20Q4JDL3 420 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 FASTKD5Q7L8L6 764 aaKnown RBP16.66■□□□□ 0.26
LRFN1-201ENST00000248668 ATL2Q8NHH9 583 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 JOSD2Q8TAC2 188 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 MGARPQ8TDB4 240 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 C9orf72Q96LT7 481 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 MLXIPLQ9NP71 852 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 IP6K2Q9UHH9 426 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 ZNF148Q9UQR1 794 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 MEFVO15553 781 aaPredicted RBP16.66■□□□□ 0.26
LRFN1-201ENST00000248668 IFNB1P01574 187 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 RARGP13631 454 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 ARHGAP1Q07960 439 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 ZNF667Q5HYK9 610 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 NLRP7Q8WX94 980 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 TBK1Q9UHD2 729 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 CHN1P15882 459 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 IVDP26440 423 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 RFC1P35251 1148 aaPredicted RBP16.66■□□□□ 0.26
LRFN1-201ENST00000248668 SLMAPQ14BN4 828 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 KATNAL2Q8IYT4 538 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 VCPIP1Q96JH7 1222 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 PCSK1NQ9UHG2 260 aa16.66■□□□□ 0.26
LRFN1-201ENST00000248668 SBF1O95248 1867 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 PROZP22891 400 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 RNF187Q5TA31 235 aaPredicted RBP16.65■□□□□ 0.26
LRFN1-201ENST00000248668 CYP4F22Q6NT55 531 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 B4GALNT4Q76KP1 1039 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 ARMC9Q7Z3E5 817 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 RNF217Q8TC41 542 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 TLCD1Q96CP7 247 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 MAF1Q9H063 256 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 MROH8Q9H579 483 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 CPP00450 1065 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 CALB1P05937 261 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 CREB1P16220 341 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 AP3M2P53677 418 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 IZUMO3Q5VZ72 239 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
LRFN1-201ENST00000248668 EGFL6Q8IUX8 553 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 RUNDC3BQ96NL0 473 aa16.65■□□□□ 0.26
LRFN1-201ENST00000248668 PSMA2P25787 234 aa16.64■□□□□ 0.26
LRFN1-201ENST00000248668 POLR2BP30876 1174 aaKnown RBP16.64■□□□□ 0.26
LRFN1-201ENST00000248668 IFT88Q13099 833 aa16.64■□□□□ 0.26
LRFN1-201ENST00000248668 SNAPC2Q13487 334 aa16.64■□□□□ 0.26
LRFN1-201ENST00000248668 PTK6Q13882 451 aa16.64■□□□□ 0.26
LRFN1-201ENST00000248668 P3H1Q32P28 736 aa16.64■□□□□ 0.26
LRFN1-201ENST00000248668 EXD1Q8NHP7 514 aa16.64■□□□□ 0.26
LRFN1-201ENST00000248668 UBA3Q8TBC4 463 aa16.64■□□□□ 0.26
LRFN1-201ENST00000248668 FBXO41Q8TF61 875 aa16.64■□□□□ 0.26
LRFN1-201ENST00000248668 SLITRK1Q96PX8 696 aa16.64■□□□□ 0.26
LRFN1-201ENST00000248668 CXCL16Q9H2A7 254 aa16.64■□□□□ 0.26
LRFN1-201ENST00000248668 GMNCA6NCL1 334 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 GAS2O43903 313 aaKnown RBP16.64■□□□□ 0.25
LRFN1-201ENST00000248668 PSMC1P62191 440 aaKnown RBP16.64■□□□□ 0.25
LRFN1-201ENST00000248668 SATB1Q01826 763 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 LRRC14Q15048 493 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 GIMAP7Q8NHV1 300 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 GRK7Q8WTQ7 553 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 MAIP1Q8WWC4 291 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 MRRFQ96E11 262 aaKnown RBP16.64■□□□□ 0.25
LRFN1-201ENST00000248668 CPXM1Q96SM3 734 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 ADAM33Q9BZ11 813 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 ARF4P18085 180 aaPredicted RBP16.64■□□□□ 0.25
LRFN1-201ENST00000248668 GBP1P32455 592 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 BYSLQ13895 437 aaKnown RBP16.64■□□□□ 0.25
LRFN1-201ENST00000248668 EMC10Q5UCC4 262 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 SYT17Q9BSW7 474 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 FAM49AQ9H0Q0 323 aaPredicted RBP16.64■□□□□ 0.25
LRFN1-201ENST00000248668 WHRNQ9P202 907 aa16.64■□□□□ 0.25
LRFN1-201ENST00000248668 LOC285556D6RIA3 1793 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 A0A0G2JMZ2 1700 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 A6NNZ2 444 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 PDHXO00330 501 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 B4GALT4O60513 344 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 ATP2C2O75185 946 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 ITIH2P19823 946 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 PHKA2P46019 1235 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 AUHQ13825 339 aaKnown RBP16.63■□□□□ 0.25
LRFN1-201ENST00000248668 TUBB8Q3ZCM7 444 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 TAX1BP1Q86VP1 789 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 KIAA0319LQ8IZA0 1049 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 GPRC5AQ8NFJ5 357 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 KCNN1Q92952 543 aa16.63■□□□□ 0.25
LRFN1-201ENST00000248668 METTL5Q9NRN9 209 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms