RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 CDH5P33151 784 aaPredicted RBP19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 CCDC181Q5TID7 509 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 MMS22LQ6ZRQ5 1243 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 UBE2Q2Q8WVN8 375 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 APBB2Q92870 758 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 HIPK3Q9H422 1215 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 SCINQ9Y6U3 715 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 CTAGE15A4D2H0 777 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 FAM163BP0C2L3 166 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 CTAGE8P0CG41 777 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 RRM1P23921 792 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 DNA2P51530 1060 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 CLCNKBP51801 687 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 AFF1P51825 1210 aaKnown RBP19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 C11orf63Q6NUN7 778 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 DENND1BQ6P3S1 775 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 DSTYKQ6XUX3 929 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 ACOT1Q86TX2 421 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 CTAGE6Q86UF2 777 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 ZNF598Q86UK7 904 aaKnown RBP19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 RTN4RL1Q86UN2 441 aaPredicted RBP19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 CTAGE4Q8IX94 777 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 ADGRF2Q8IZF7 708 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 URGCPQ8TCY9 931 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 CAPZA3Q96KX2 299 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 UROC1Q96N76 676 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 TOX2Q96NM4 488 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 PSMB7Q99436 277 aa19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 CHORDC1Q9UHD1 332 aaPredicted RBP19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 PACSIN2Q9UNF0 486 aaPredicted RBP19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.87■□□□□ 0.77
TNFSF9-201ENST00000245817 CASTOR2A6NHX0 329 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 TMEM110-MUSTN1A8MSY1 372 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 M0QYV0 167 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 CTIFO43310 598 aaKnown RBP19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 NBNO60934 754 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 MICAL2O94851 1124 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 MMP8P22894 467 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 PAFAH1B1P43034 410 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 MNX1P50219 401 aaPredicted RBP19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 MESDQ14696 234 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 TNIP3Q96KP6 325 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 GOLPH3Q9H4A6 298 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 SYNCQ9H7C4 482 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 PARVAQ9NVD7 372 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 STRIP2Q9ULQ0 834 aa19.86■□□□□ 0.77
TNFSF9-201ENST00000245817 EFCAB8A8MWE9 144 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 O00370 1275 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 KIF4AO95239 1232 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 COL6A1P12109 1028 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 PAX3P23760 479 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 CXCR5P32302 372 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 TUBB4BP68371 445 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 FAM189BP81408 668 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 TUSC3Q13454 348 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 PLEKHG4Q58EX7 1191 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 PHLDB2Q86SQ0 1253 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 NT5DC3Q86UY8 548 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 DBF4BQ8NFT6 615 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 UBXN4Q92575 508 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 PAWRQ96IZ0 340 aaKnown RBP19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 SELENOOQ9BVL4 669 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 KANSL3Q9P2N6 904 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 RNF14Q9UBS8 474 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 HESX1Q9UBX0 185 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 L1RE1Q9UN81 338 aa19.85■□□□□ 0.77
TNFSF9-201ENST00000245817 MYO1FO00160 1098 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 ZNF185O15231 689 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 PDGFRBP09619 1106 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 WARSP23381 471 aaKnown RBP19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 TLE2Q04725 743 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 TRIM60Q495X7 471 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 C2CD6Q53TS8 623 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 C1orf53Q5VUE5 145 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 LCLAT1Q6UWP7 414 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 NECAB2Q7Z6G3 386 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 PDCL2Q8N4E4 241 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 SENP8Q96LD8 212 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 ABCB6Q9NP58 842 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 ANAPC7Q9UJX3 599 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 PCDHB7Q9Y5E2 793 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 ALG6Q9Y672 507 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 DNAH12Q6ZR08 3092 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 PDCD11Q14690 1871 aaKnown RBP19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 KCNK3O14649 394 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 FAAP100Q0VG06 881 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 PTPROQ16827 1216 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 UPP1Q16831 310 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 ABI1Q8IZP0 508 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 TMEM86AQ8N2M4 240 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 WDTC1Q8N5D0 677 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 C12orf29Q8N999 325 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 DIS3LQ8TF46 1054 aaKnown RBP19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 KBTBD7Q8WVZ9 684 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 GOLGA1Q92805 767 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 PBKQ96KB5 322 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 RPGRIP1Q96KN7 1286 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 MIS12Q9H081 205 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 C11orf49Q9H6J7 331 aa19.84■□□□□ 0.77
TNFSF9-201ENST00000245817 TMEM161AQ9NX61 479 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms