RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CTTNBP2NLQ9P2B4 639 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 GTF3C4Q9UKN8 822 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 PIRO00625 290 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 PMM2O15305 246 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 ARHGAP6O43182 974 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 VNN1O95497 513 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 PTPN1P18031 435 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 TKTP29401 623 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 FIGNQ5HY92 759 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 TRIM11Q96F44 468 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 HAUS4Q9H6D7 363 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 TLE6Q9H808 572 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 CEP290O15078 2479 aa11.82□□□□□ -0.52
TNFAIP3-201ENST00000237289 KRT86O43790 486 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 H2AFZP0C0S5 128 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 PNMA6AP0CW24 399 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 KCNMA1Q12791 1236 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 GOLGA7BQ2TAP0 167 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 H2AFVQ71UI9 128 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 PDCL2Q8N4E4 241 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 TMEM174Q8WUU8 243 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 KAT5Q92993 513 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 BORCS6Q96GS4 357 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 MRPL45Q9BRJ2 306 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 PTPRJQ12913 1337 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 CETN2P41208 172 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 TUFMP49411 452 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 RBM23Q86U06 439 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 PANX2Q96RD6 677 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 AGPAT1Q99943 283 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 NGRNQ9NPE2 291 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 SIX4Q9UIU6 781 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 L1RE1Q9UN81 338 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 SIK3Q9Y2K2 1263 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 CDY1Q9Y6F8 540 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 F8VZ95 297 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 PAEPP09466 180 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 TNNT1P13805 278 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 UBE2Q1Q7Z7E8 422 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 ZNF677Q86XU0 584 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 POF1BQ8WVV4 589 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 PAAF1Q9BRP4 392 aa11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 NHEJ1Q9H9Q4 299 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-201ENST00000237289 GOLGA8SH3BPF8 625 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 FXR1P51114 621 aaKnown RBP eCLIP11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 EPHB4P54760 987 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 ZNF697Q5TEC3 545 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 ALKAL1Q6UXT8 129 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 UBA3Q8TBC4 463 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 RNF139Q8WU17 664 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 FAXDC2Q96IV6 333 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 ALS2CR12Q96Q35 445 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 SELENOOQ9BVL4 669 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 TRMT1Q9NXH9 659 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 ADAM22Q9P0K1 906 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 EPN1Q9Y6I3 576 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 GYPCP04921 128 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 B3GALNT2Q8NCR0 500 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 PLVAPQ9BX97 442 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 TLR9Q9NR96 1032 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 SOD2P04179 222 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 EPHB3P54753 998 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 WNT7BP56706 349 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 NAA35Q5VZE5 725 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 ALKBH5Q6P6C2 394 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 CCDC149Q6ZUS6 474 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 PPM1EQ8WY54 764 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 ELOVL4Q9GZR5 314 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 GDAP2Q9NXN4 497 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 TMEM110-MUSTN1A8MSY1 372 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 KIF5CO60282 957 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 GLUD1P00367 558 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 SMARCB1Q12824 385 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 PRSS55Q6UWB4 352 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 TOGARAM2Q6ZUX3 1019 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 CCDC170Q8IYT3 715 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 ZNF592Q92610 1267 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 ZNF653Q96CK0 615 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 B3GALT6Q96L58 329 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 KRT82Q9NSB4 513 aa11.8□□□□□ -0.52
TNFAIP3-201ENST00000237289 TACC1O75410 805 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 CYP11B1P15538 503 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 RGS7P49802 495 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 BCAT1P54687 386 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 SLC2A14Q8TDB8 520 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 SYN2Q92777 582 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 ACBD6Q9BR61 282 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 APOBEC3GQ9HC16 384 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 MYO9BQ13459 2157 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 GOLGA6L9A6NEM1 432 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 LCP1P13796 627 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 SOWAHAQ2M3V2 549 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 PPM1LQ5SGD2 360 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 DNAJC24Q6P3W2 148 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 SMARCD1Q96GM5 515 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 ZNF512Q96ME7 567 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 TSGA10Q9BZW7 698 aa11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 FAM124BQ9H5Z6 455 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-201ENST00000237289 FBXL5Q9UKA1 691 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms