RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 ZC3H11AO75152 810 aaKnown RBP eCLIP15.21■□□□□ 0.03
PTK7-201ENST00000230418 ALDH3A1P30838 453 aa15.21■□□□□ 0.03
PTK7-201ENST00000230418 TAF12Q16514 161 aa15.21■□□□□ 0.03
PTK7-201ENST00000230418 C11orf63Q6NUN7 778 aa15.21■□□□□ 0.03
PTK7-201ENST00000230418 PPP1R2P3Q6NXS1 205 aa15.21■□□□□ 0.03
PTK7-201ENST00000230418 RSPH3Q86UC2 560 aa15.21■□□□□ 0.03
PTK7-201ENST00000230418 RCOR2Q8IZ40 523 aa15.21■□□□□ 0.03
PTK7-201ENST00000230418 LENG1Q96BZ8 264 aaPredicted RBP15.21■□□□□ 0.03
PTK7-201ENST00000230418 ARHGAP28Q9P2N2 729 aa15.21■□□□□ 0.03
PTK7-201ENST00000230418 RGS20O76081 388 aa15.21■□□□□ 0.02
PTK7-201ENST00000230418 GCLCP48506 637 aaPredicted RBP15.21■□□□□ 0.02
PTK7-201ENST00000230418 RNASELQ05823 741 aaKnown RBP15.21■□□□□ 0.02
PTK7-201ENST00000230418 DNAAF3Q8N9W5 541 aa15.21■□□□□ 0.02
PTK7-201ENST00000230418 CCDC110Q8TBZ0 833 aa15.21■□□□□ 0.02
PTK7-201ENST00000230418 MFSD14AQ96MC6 490 aa15.21■□□□□ 0.02
PTK7-201ENST00000230418 NEUROG2Q9H2A3 272 aa15.21■□□□□ 0.02
PTK7-201ENST00000230418 PABPC3Q9H361 631 aaKnown RBP15.21■□□□□ 0.02
PTK7-201ENST00000230418 RRAGCQ9HB90 399 aa15.21■□□□□ 0.02
PTK7-201ENST00000230418 DOCK2Q92608 1830 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 NFASCO94856 1347 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 CCDC78A2IDD5 438 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 CPP00450 1065 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 CFHP08603 1231 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 GRIK4Q16099 956 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 CCDC6Q16204 474 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 DENND1BQ6P3S1 775 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 SLC39A4Q6P5W5 647 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 TRAIPQ9BWF2 469 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 NACA2Q9H009 215 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 TIMM13Q9Y5L4 95 aaPredicted RBP15.2■□□□□ 0.02
PTK7-201ENST00000230418 KCNN4O15554 427 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 MAFO75444 373 aaPredicted RBP15.2■□□□□ 0.02
PTK7-201ENST00000230418 APRTP07741 180 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 ETS1P14921 441 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 ARL1P40616 181 aaPredicted RBP15.2■□□□□ 0.02
PTK7-201ENST00000230418 PTPN11Q06124 597 aaPredicted RBP15.2■□□□□ 0.02
PTK7-201ENST00000230418 CACNB2Q08289 660 aaPredicted RBP15.2■□□□□ 0.02
PTK7-201ENST00000230418 TMC3Q7Z5M5 1100 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 PPM1NQ8N819 430 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 CAVIN3Q969G5 261 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 FIZ1Q96SL8 496 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 SIK2Q9H0K1 926 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 CDT1Q9H211 546 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 PCDHA3Q9Y5H8 950 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 VGLL3A8MV65 326 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 SHBGP04278 402 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 NDST1P52848 882 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 PIGHQ14442 188 aaPredicted RBP15.2■□□□□ 0.02
PTK7-201ENST00000230418 ZPBP2Q6X784 338 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 PLEKHH3Q7Z736 793 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 SCN4BQ8IWT1 228 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 ZNF516Q92618 1163 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 TSNARE1Q96NA8 513 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 CDC42EP4Q9H3Q1 356 aaKnown RBP15.2■□□□□ 0.02
PTK7-201ENST00000230418 RAB6BQ9NRW1 208 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 SMCHD1A6NHR9 2005 aa15.2■□□□□ 0.02
PTK7-201ENST00000230418 RPTORQ8N122 1335 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 A0A0B4J269 797 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 MT-ND3P03897 115 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 CHRNB2P17787 502 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 GTF2A2P52657 109 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 ARL4CP56559 192 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 TAS2R40P59535 323 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 ITKQ08881 620 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 ZNF844Q08AG5 666 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 RWDD4Q6NW29 188 aaKnown RBP15.19■□□□□ 0.02
PTK7-201ENST00000230418 GPR20Q99678 358 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 ACO2Q99798 780 aaKnown RBP15.19■□□□□ 0.02
PTK7-201ENST00000230418 CNOT10Q9H9A5 744 aaKnown RBP15.19■□□□□ 0.02
PTK7-201ENST00000230418 CHMP2BQ9UQN3 213 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 IL18RAPO95256 599 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 IFI35P80217 286 aaPredicted RBP15.19■□□□□ 0.02
PTK7-201ENST00000230418 IL9RQ01113 521 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 TFDP2Q14188 446 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 TMEM63BQ5T3F8 832 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 FYB2Q5VWT5 728 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 DHX33Q9H6R0 707 aaKnown RBP15.19■□□□□ 0.02
PTK7-201ENST00000230418 APOBEC3GQ9HC16 384 aaKnown RBP15.19■□□□□ 0.02
PTK7-201ENST00000230418 BCORQ6W2J9 1755 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 MYH7BA7E2Y1 1941 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 TTLL13PA6NNM8 815 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 ITIH2P19823 946 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 ACAT1P24752 427 aaKnown RBP15.19■□□□□ 0.02
PTK7-201ENST00000230418 ACTL9Q8TC94 416 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 HASPINQ8TF76 798 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 ZNF473Q8WTR7 871 aaKnown RBP15.19■□□□□ 0.02
PTK7-201ENST00000230418 TTC17Q96AE7 1141 aa15.19■□□□□ 0.02
PTK7-201ENST00000230418 TACO1Q9BSH4 297 aaKnown RBP15.19■□□□□ 0.02
PTK7-201ENST00000230418 RFC1P35251 1148 aaPredicted RBP15.18■□□□□ 0.02
PTK7-201ENST00000230418 OTUD4Q01804 1114 aaKnown RBP15.18■□□□□ 0.02
PTK7-201ENST00000230418 ROR1Q01973 937 aa15.18■□□□□ 0.02
PTK7-201ENST00000230418 HIF1AQ16665 826 aa15.18■□□□□ 0.02
PTK7-201ENST00000230418 TMEM192Q8IY95 271 aa15.18■□□□□ 0.02
PTK7-201ENST00000230418 C12orf29Q8N999 325 aa15.18■□□□□ 0.02
PTK7-201ENST00000230418 RUBCNQ92622 972 aa15.18■□□□□ 0.02
PTK7-201ENST00000230418 AGAP3Q96P47 875 aa15.18■□□□□ 0.02
PTK7-201ENST00000230418 FAM193BQ96PV7 902 aaPredicted RBP15.18■□□□□ 0.02
PTK7-201ENST00000230418 RBPJLQ9UBG7 517 aa15.18■□□□□ 0.02
PTK7-201ENST00000230418 DNPEPQ9ULA0 475 aa15.18■□□□□ 0.02
PTK7-201ENST00000230418 NHSQ6T4R5 1651 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms