RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 VCX3BQ9H321 246 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 VCX3AQ9NNX9 186 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 TBC1D22BQ9NU19 505 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 WDR91A4D1P6 747 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 PLA2G6O60733 806 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 ATP6V1C1P21283 382 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 USP46P62068 366 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 ZBTB16Q05516 673 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 MCL1Q07820 350 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 FASTKD3Q14CZ7 662 aaKnown RBP9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 TMED2Q15363 201 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 STYK1Q6J9G0 422 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 STK32AQ8WU08 396 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 ACSF2Q96CM8 615 aaPredicted RBP9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 BICD1Q96G01 975 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 WNK4Q96J92 1243 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 OSBPL8Q9BZF1 889 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 GABBR1Q9UBS5 961 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 PRKAG3Q9UGI9 489 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 TCEAL9Q9UHQ7 104 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 EXOC7Q9UPT5 735 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 RASA4BC9J798 803 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 RASA4O43374 803 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 PIAS1O75925 651 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 TNNI1P19237 187 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 TAC1P20366 129 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 NSFP46459 744 aaKnown RBP9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 ECHDC2Q86YB7 292 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 VPS52Q8N1B4 723 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 GPD1LQ8N335 351 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 TMC2Q8TDI7 906 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 HIC2Q96JB3 615 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 RBM15Q96T37 977 aaKnown RBP eCLIP9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 PGAP2Q9UHJ9 254 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 DCTN4Q9UJW0 460 aa9.91□□□□□ -0.82
HLA-DOA-201ENST00000229829 WDR64B1ANS9 1081 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 PROSCO94903 275 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 PSMC4P43686 418 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 RASSF2P50749 326 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 NLRP11P59045 1033 aaKnown RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 RPL7AP62424 266 aaKnown RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 GCNT1Q02742 428 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 DNAJC3Q13217 504 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 RSBN1LQ6PCB5 846 aaPredicted RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 MON1BQ7L1V2 547 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 NIPA1Q7RTP0 329 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 GSTA5Q7RTV2 222 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 RNF168Q8IYW5 571 aaPredicted RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 GBP7Q8N8V2 638 aaPredicted RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 CEP70Q8NHQ1 597 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 ZBTB45Q96K62 511 aaPredicted RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 PDCD2LQ9BRP1 358 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 SLCO1B3Q9NPD5 702 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 C1orf112Q9NSG2 853 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 RIPK3Q9Y572 518 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 TPD52L2O43399 206 aaKnown RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 GCAP28676 217 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 MAGEA4P43358 317 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 MCCD1P59942 119 aaPredicted RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 SNRPFP62306 86 aaKnown RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 MAMLD1Q13495 774 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 SPDYE2Q495Y8 402 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 SEZ6Q53EL9 994 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 ZBTB41Q5SVQ8 909 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 SNX30Q5VWJ9 437 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 TDRD10Q5VZ19 366 aaKnown RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 TMEM270Q6UE05 265 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 GRK7Q8WTQ7 553 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 HAUS1Q96CS2 278 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 HAPLN2Q9GZV7 340 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 MYLK2Q9H1R3 596 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 APOBEC3GQ9HC16 384 aaKnown RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 AVENQ9NQS1 362 aaPredicted RBP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 XPNPEP1Q9NQW7 623 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 TXLNGQ9NUQ3 528 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 NMRK1Q9NWW6 199 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 EURLQ9NYK6 297 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 DNPEPQ9ULA0 475 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 PCDHB2Q9Y5E7 798 aa9.9□□□□□ -0.82
HLA-DOA-201ENST00000229829 DOCK5Q9H7D0 1870 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 POC1B-GALNT4F8VUJ3 575 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 SMAPO00193 183 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 CAPN9O14815 690 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 CDH16O75309 829 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 BANF1O75531 89 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 HLA-DRAP01903 254 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 OATP04181 439 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 CYP1A1P04798 512 aaPredicted RBP9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 KLRC2P26717 231 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 CENPCQ03188 943 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 CCNG2Q16589 344 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 SWSAP1Q6NVH7 229 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 C15orf39Q6ZRI6 1047 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 ARMCX6Q7L4S7 300 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 FAM13CQ8NE31 585 aa9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 SCG3Q8WXD2 468 aaKnown RBP9.9□□□□□ -0.83
HLA-DOA-201ENST00000229829 MAML1Q92585 1016 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms