RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 KLF1Q13351 362 aaPredicted RBP15.27■□□□□ 0.04
PRKAB1-201ENST00000229328 KYAT1Q16773 422 aa15.27■□□□□ 0.04
PRKAB1-201ENST00000229328 DNAJC21Q5F1R6 531 aaKnown RBP15.27■□□□□ 0.04
PRKAB1-201ENST00000229328 CEP85LQ5SZL2 805 aa15.27■□□□□ 0.04
PRKAB1-201ENST00000229328 TXNRD3NBQ6F5E7 133 aa15.27■□□□□ 0.04
PRKAB1-201ENST00000229328 DCUN1D2Q6PH85 259 aa15.27■□□□□ 0.04
PRKAB1-201ENST00000229328 USP6NLQ92738 828 aa15.27■□□□□ 0.04
PRKAB1-201ENST00000229328 RNF25Q96BH1 459 aaPredicted RBP15.27■□□□□ 0.04
PRKAB1-201ENST00000229328 LRRC4CQ9HCJ2 640 aa15.27■□□□□ 0.04
PRKAB1-201ENST00000229328 C2CD2Q9Y426 696 aa15.27■□□□□ 0.04
PRKAB1-201ENST00000229328 CEP83Q9Y592 693 aa15.27■□□□□ 0.04
PRKAB1-201ENST00000229328 NRCAMQ92823 1304 aa15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 GOLGA8SH3BPF8 625 aa15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 CYP2C9P11712 490 aa15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 ADCY2Q08462 1091 aa15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 MFSD10Q14728 455 aa15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 CATSPER4Q7RTX7 472 aa15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 DNAJB3Q8WWF6 145 aa15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 TMEM176AQ96HP8 235 aa15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 CPXM1Q96SM3 734 aa15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 GCOM2Q9BZD3 368 aaPredicted RBP15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 LHX5Q9H2C1 402 aa15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 ITGA11Q9UKX5 1188 aa15.27■□□□□ 0.03
PRKAB1-201ENST00000229328 MBLAC1A4D2B0 266 aaPredicted RBP15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 PPEF2O14830 753 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 PPFIA2O75334 1257 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 ECEL1O95672 775 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 C17orf99Q6UX52 265 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 C3orf20Q8ND61 904 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 JOSD2Q8TAC2 188 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 TMEM40Q8WWA1 233 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 ACSF2Q96CM8 615 aaPredicted RBP15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 DCLK3Q9C098 648 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 DNAH12Q6ZR08 3092 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 CITO14578 2027 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 TREHO43280 583 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 MED7O43513 233 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 MICAL2O94851 1124 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 RFC1P35251 1148 aaPredicted RBP15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 RBP5P82980 135 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 ZNF844Q08AG5 666 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 UBAP2Q5T6F2 1119 aaKnown RBP15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 LRIG3Q6UXM1 1119 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 DPH6Q7L8W6 267 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 EXD1Q8NHP7 514 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 FAXDC2Q96IV6 333 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 OSBPL8Q9BZF1 889 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 EPB41L4BQ9H329 900 aa15.26■□□□□ 0.03
PRKAB1-201ENST00000229328 TRIP11Q15643 1979 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 SMIM35A0A1B0GVV1 85 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 ERBB2P04626 1255 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 KRT10P13645 584 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 PSEN2P49810 448 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 NDST1P52848 882 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 ADAM17P78536 824 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 KRT17Q04695 432 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 DCAF4L1Q3SXM0 396 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 SLC27A1Q6PCB7 646 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 HEXIM2Q96MH2 286 aaKnown RBP15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 CYP3A43Q9HB55 503 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 MANSC4A6NHS7 340 aaPredicted RBP15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 TP73O15350 636 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 MYL3P08590 195 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 DARSP14868 501 aaKnown RBP15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 CYP3A5P20815 502 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 MTMR3Q13615 1198 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 PPP1R7Q15435 360 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 TRIP13Q15645 432 aaPredicted RBP15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 GLRA4Q5JXX5 417 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 SLCO2A1Q92959 643 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 C18orf25Q96B23 403 aaPredicted RBP15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 RUNDC3BQ96NL0 473 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 NXF3Q9H4D5 531 aaKnown RBP15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 TUBGCP4Q9UGJ1 667 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 GJD2Q9UKL4 321 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.25■□□□□ 0.036e-7■■■□□ 15.8
PRKAB1-201ENST00000229328 PASKQ96RG2 1323 aa15.25■□□□□ 0.03
PRKAB1-201ENST00000229328 VGLL3A8MV65 326 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 HAS3O00219 553 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 P4HA1P13674 534 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 PSMC1P62191 440 aaKnown RBP15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 NFX1Q12986 1120 aaKnown RBP15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 MFSD7Q6UXD7 560 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 UBA3Q8TBC4 463 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 MAIP1Q8WWC4 291 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 SNX27Q96L92 541 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 TMBIM4Q9HC24 238 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 BARX2Q9UMQ3 279 aaPredicted RBP15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 M0QYV0 167 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 INCA1Q0VD86 236 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 KAZNQ674X7 775 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 XYLT1Q86Y38 959 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 IFNL1Q8IU54 200 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 ARFGAP1Q8N6T3 406 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 EMC1Q8N766 993 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 C12orf29Q8N999 325 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 RAPGEF5Q92565 580 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 ART4Q93070 314 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 ATP6V1G3Q96LB4 118 aa15.24■□□□□ 0.03
PRKAB1-201ENST00000229328 SLITRK1Q96PX8 696 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms