RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 NPTX2P47972 431 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 SERPINB9P50453 376 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 BACE1P56817 501 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 AP2B1P63010 937 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 EFHC1Q5JVL4 640 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 AGBL2Q5U5Z8 902 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 RGS9BPQ6ZS82 235 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 KCNV2Q8TDN2 545 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 BLOC1S4Q9NUP1 217 aa12.05□□□□□ -0.48
NOD1-201ENST00000222823 H3BQF6 201 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 EEF2KO00418 725 aaKnown RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 SPAG6O75602 509 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 ESRRBO95718 433 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 ITGB3P05106 788 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 CETPP11597 493 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 COILP38432 576 aaPredicted RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 EVX2Q03828 476 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 STX3Q13277 289 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 LBRQ14739 615 aaKnown RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 PDK1Q15118 436 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 SV2CQ496J9 727 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 NOTUMQ6P988 496 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 SZRD1Q7Z422 152 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 DDIASQ8IXT1 998 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 SLC26A7Q8TE54 656 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 ZNF473Q8WTR7 871 aaKnown RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 TSSK1BQ9BXA7 367 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 ALS2Q96Q42 1657 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 LRRIQ3A6PVS8 624 aaPredicted RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 MAP2K7O14733 419 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 LSP1P33241 339 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 GNL1P36915 607 aaPredicted RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 CENPCQ03188 943 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 COBLL1Q53SF7 1204 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 AP1ARQ63HQ0 302 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 ATPAF2Q8N5M1 289 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 PPHLN1Q8NEY8 458 aaKnown RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 SCFD1Q8WVM8 642 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 ING2Q9H160 280 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 USP15Q9Y4E8 981 aaPredicted RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 CRYBG1Q9Y4K1 1723 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 TMEM120BA0PK00 339 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 ZNF197O14709 1029 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 AKAP3O75969 853 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 KCNA2P16389 499 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 HUNKP57058 714 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 KDSRQ06136 332 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 ANO4Q32M45 955 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 ZNF662Q6ZS27 426 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 ZNF720Q7Z2F6 126 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 KRT35Q92764 455 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 MTMR9Q96QG7 549 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 KLF6Q99612 283 aaPredicted RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 RANBP17Q9H2T7 1088 aaKnown RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 NDE1Q9NXR1 346 aa12.04□□□□□ -0.48
NOD1-201ENST00000222823 AFF4Q9UHB7 1163 aaKnown RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 TSR3Q9UJK0 312 aaKnown RBP12.04□□□□□ -0.48
NOD1-201ENST00000222823 PFDN1O60925 122 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 HMBSP08397 361 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 KRT4P19013 534 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 PGM1P36871 562 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 IRAK1P51617 712 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 USP10Q14694 798 aaKnown RBP12.03□□□□□ -0.48
NOD1-201ENST00000222823 TMEM119Q4V9L6 283 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 CYP4A22Q5TCH4 519 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 SLC7A14Q8TBB6 771 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 ZSWIM1Q9BR11 485 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 A0A0U1RQJ8 604 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 PSMD3O43242 534 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 DNAJC6O75061 913 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 SNRPAP09012 282 aaKnown RBP12.03□□□□□ -0.48
NOD1-201ENST00000222823 AARSP49588 968 aaKnown RBP eCLIP12.03□□□□□ -0.48
NOD1-201ENST00000222823 MAPK7Q13164 816 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 ICE2Q659A1 982 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 SRLQ86TD4 932 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 PTPRN2Q92932 1015 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 ARL8AQ96BM9 186 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 ZNF512Q96ME7 567 aaPredicted RBP12.03□□□□□ -0.48
NOD1-201ENST00000222823 DDX50Q9BQ39 737 aaKnown RBP12.03□□□□□ -0.48
NOD1-201ENST00000222823 METTL5Q9NRN9 209 aaKnown RBP12.03□□□□□ -0.48
NOD1-201ENST00000222823 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
NOD1-201ENST00000222823 NFIBO00712 420 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 GARTP22102 1010 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 SERPINB4P48594 390 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 FNTAP49354 379 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 PTK7Q13308 1070 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 MAPRE2Q15555 327 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 ANO5Q75V66 913 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 CYFIP2Q96F07 1278 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 PDCD2LQ9BRP1 358 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 MARCOQ9UEW3 520 aaPredicted RBP12.03□□□□□ -0.48
NOD1-201ENST00000222823 TMCC1O94876 653 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 SGPL1O95470 568 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 NPTXRO95502 500 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 GZMAP12544 262 aa12.03□□□□□ -0.48
NOD1-201ENST00000222823 STIP1P31948 543 aaKnown RBP12.03□□□□□ -0.48
NOD1-201ENST00000222823 SPRP35270 261 aaPredicted RBP12.03□□□□□ -0.48
NOD1-201ENST00000222823 NAMPTP43490 491 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms