RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 NCK2O43639 380 aa25.25■■□□□ 1.63
HOMER3-201ENST00000221222 GTF2F1P35269 517 aaKnown RBP eCLIP25.25■■□□□ 1.63
HOMER3-201ENST00000221222 RAP1GAPP47736 663 aa25.25■■□□□ 1.63
HOMER3-201ENST00000221222 CDH8P55286 799 aa25.25■■□□□ 1.63
HOMER3-201ENST00000221222 ROR1Q01973 937 aa25.25■■□□□ 1.63
HOMER3-201ENST00000221222 LILRA6Q6PI73 481 aa25.25■■□□□ 1.63
HOMER3-201ENST00000221222 TRIM65Q6PJ69 517 aa25.25■■□□□ 1.63
HOMER3-201ENST00000221222 GLYCTKQ8IVS8 523 aa25.25■■□□□ 1.63
HOMER3-201ENST00000221222 ZCWPW1Q9H0M4 648 aa25.25■■□□□ 1.63
HOMER3-201ENST00000221222 SNX25Q9H3E2 840 aa25.25■■□□□ 1.63
HOMER3-201ENST00000221222 UBE2ZQ9H832 354 aaPredicted RBP25.25■■□□□ 1.63
HOMER3-201ENST00000221222 HCFC2Q9Y5Z7 792 aa25.25■■□□□ 1.63
HOMER3-201ENST00000221222 WEE2P0C1S8 567 aa25.24■■□□□ 1.63
HOMER3-201ENST00000221222 SLC9A1P19634 815 aa25.24■■□□□ 1.63
HOMER3-201ENST00000221222 TBXAS1P24557 533 aaPredicted RBP25.24■■□□□ 1.63
HOMER3-201ENST00000221222 PON1P27169 355 aa25.24■■□□□ 1.63
HOMER3-201ENST00000221222 PCSK1P29120 753 aa25.24■■□□□ 1.63
HOMER3-201ENST00000221222 GNL1P36915 607 aaPredicted RBP25.24■■□□□ 1.63
HOMER3-201ENST00000221222 INCA1Q0VD86 236 aa25.24■■□□□ 1.63
HOMER3-201ENST00000221222 LRMPQ12912 555 aa25.24■■□□□ 1.63
HOMER3-201ENST00000221222 CUL2Q13617 745 aa25.24■■□□□ 1.63
HOMER3-201ENST00000221222 NME7Q9Y5B8 376 aa25.24■■□□□ 1.63
HOMER3-201ENST00000221222 WDR27A2RRH5 827 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 TGM5O43548 720 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 ABLIM3O94929 683 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 GLUD1P00367 558 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 LMO2P25791 158 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 GCNT1Q02742 428 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 KCNMA1Q12791 1236 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 GPR17Q13304 367 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 CTC1Q2NKJ3 1217 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 FKBP15Q5T1M5 1219 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 PALB2Q86YC2 1186 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 TTC39CQ8N584 583 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 OR6B3Q8NGW1 331 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 ZNF461Q8TAF7 563 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 TMEM209Q96SK2 561 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 CDH9Q9ULB4 789 aa25.23■■□□□ 1.63
HOMER3-201ENST00000221222 HCRTO43612 131 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 KCNA5P22460 613 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 TSPY1Q01534 308 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 ADAM15Q13444 863 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 TPGS2Q68CL5 300 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 PHLDB3Q6NSJ2 640 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 TMEM184AQ6ZMB5 413 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 UNC93AQ86WB7 457 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 ARHGEF19Q8IW93 802 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 RNF214Q8ND24 703 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 VN1R2Q8NFZ6 395 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 PKMYT1Q99640 499 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 ARID3AQ99856 593 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 IGFLR1Q9H665 355 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 SIX2Q9NPC8 291 aa25.22■■□□□ 1.63
HOMER3-201ENST00000221222 BARX2Q9UMQ3 279 aaPredicted RBP25.22■■□□□ 1.63
HOMER3-201ENST00000221222 A8MXQ7 604 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 GLP2RO95838 553 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 CPB1P15086 417 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 ACAT1P24752 427 aaKnown RBP25.21■■□□□ 1.63
HOMER3-201ENST00000221222 ARPP19P56211 112 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 INTS6LQ5JSJ4 861 aaKnown RBP25.21■■□□□ 1.63
HOMER3-201ENST00000221222 DPY19L2P1Q6NXN4 242 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 DCP1BQ8IZD4 617 aaKnown RBP25.21■■□□□ 1.63
HOMER3-201ENST00000221222 PPM1KQ8N3J5 372 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 FAM81BQ96LP2 452 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 SYT15Q9BQS2 421 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 RTN4Q9NQC3 1192 aaKnown RBP25.21■■□□□ 1.63
HOMER3-201ENST00000221222 CISHQ9NSE2 258 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 APEX2Q9UBZ4 518 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 RAPGEFL1Q9UHV5 662 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 FBXW11Q9UKB1 542 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 MAFFQ9ULX9 164 aa25.21■■□□□ 1.63
HOMER3-201ENST00000221222 A0A1B0GTH6 734 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 CILPO75339 1184 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 PDGFRBP09619 1106 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 OR4Q2P0C623 313 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 EPCAMP16422 314 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 YWHAEP62258 255 aaKnown RBP25.2■■□□□ 1.63
HOMER3-201ENST00000221222 SMARCB1Q12824 385 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 FILIP1LQ4L180 1135 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 EP400NLQ6ZTU2 488 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 LRRTM3Q86VH5 581 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 UBR7Q8N806 425 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 HDAC7Q8WUI4 952 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 PABPC5Q96DU9 382 aaKnown RBP25.2■■□□□ 1.63
HOMER3-201ENST00000221222 ERGIC2Q96RQ1 377 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 PLEKHA4Q9H4M7 779 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 AFF4Q9UHB7 1163 aaKnown RBP25.2■■□□□ 1.63
HOMER3-201ENST00000221222 DPP7Q9UHL4 492 aa25.2■■□□□ 1.63
HOMER3-201ENST00000221222 LINC01565O15544 149 aa25.19■■□□□ 1.62
HOMER3-201ENST00000221222 SERPINC1P01008 464 aa25.19■■□□□ 1.62
HOMER3-201ENST00000221222 ATF2P15336 505 aa25.19■■□□□ 1.62
HOMER3-201ENST00000221222 COL9A1P20849 921 aa25.19■■□□□ 1.62
HOMER3-201ENST00000221222 NDST1P52848 882 aa25.19■■□□□ 1.62
HOMER3-201ENST00000221222 FANCCQ00597 558 aa25.19■■□□□ 1.62
HOMER3-201ENST00000221222 UBXN1Q04323 297 aa25.19■■□□□ 1.62
HOMER3-201ENST00000221222 FAM171BQ6P995 826 aa25.19■■□□□ 1.62
HOMER3-201ENST00000221222 RNF19BQ6ZMZ0 732 aa25.19■■□□□ 1.62
HOMER3-201ENST00000221222 RRAGAQ7L523 313 aa25.19■■□□□ 1.62
HOMER3-201ENST00000221222 ENOSF1Q7L5Y1 443 aa25.19■■□□□ 1.62
HOMER3-201ENST00000221222 WHAMMQ8TF30 809 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms