RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 GRM2Q14416 872 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 B3GNT9Q6UX72 402 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 FNBP1Q96RU3 617 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 MIPEPQ99797 713 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 CELF4Q9BZC1 486 aaKnown RBP14.34□□□□□ -0.11
GABPB1-201ENST00000220429 DEFB129Q9H1M3 183 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 MYOZ2Q9NPC6 264 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 FBXO9Q9UK97 447 aaPredicted RBP14.34□□□□□ -0.11
GABPB1-201ENST00000220429 ANGPTL2Q9UKU9 493 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 CTDP1Q9Y5B0 961 aaPredicted RBP14.34□□□□□ -0.11
GABPB1-201ENST00000220429 WASF2Q9Y6W5 498 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 CLIC2O15247 247 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 ZNF862O60290 1169 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 MGEA5O60502 916 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 PIM1P11309 404 aaPredicted RBP14.33□□□□□ -0.12
GABPB1-201ENST00000220429 NMT1P30419 496 aaKnown RBP14.33□□□□□ -0.12
GABPB1-201ENST00000220429 CASP4P49662 377 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 TMCO5AQ8N6Q1 288 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 ITPKCQ96DU7 683 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 VPS50Q96JG6 964 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 CADM1Q9BY67 442 aaKnown RBP14.33□□□□□ -0.12
GABPB1-201ENST00000220429 IKZF4Q9H2S9 585 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 SELENONQ9NZV5 590 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 COL20A1Q9P218 1284 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 CCPG1Q9ULG6 757 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 PPP1R9AQ9ULJ8 1098 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 FAF1Q9UNN5 650 aaPredicted RBP14.33□□□□□ -0.12
GABPB1-201ENST00000220429 TGFB1I1O43294 461 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 FAM13AO94988 1023 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 ICAM1P05362 532 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 ACTN1P12814 892 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 SLC9A1P19634 815 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 CRABP2P29373 138 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 HSD17B4P51659 736 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 SEPT7Q16181 437 aaKnown RBP14.33□□□□□ -0.12
GABPB1-201ENST00000220429 ALDH16A1Q8IZ83 802 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 PLEKHO2Q8TD55 490 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 GIT1Q9Y2X7 761 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 NOC2LQ9Y3T9 749 aaKnown RBP14.33□□□□□ -0.12
GABPB1-201ENST00000220429 ZMYM2Q9UBW7 1377 aa14.33□□□□□ -0.12
GABPB1-201ENST00000220429 EGFRP00533 1210 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 KLRC1P26715 233 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 STX2P32856 288 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 RAPGEF1Q13905 1077 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 CIAPIN1Q6FI81 312 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 VSTM1Q6UX27 236 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 MYCT1Q8N699 235 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 RIN3Q8TB24 985 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 MAGEB18Q96M61 343 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 FIZ1Q96SL8 496 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 WDR11Q9BZH6 1224 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 KCNK9Q9NPC2 374 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 FRMPD4Q14CM0 1322 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 NFIBO00712 420 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 HNRNPCL1O60812 293 aaKnown RBP14.32□□□□□ -0.12
GABPB1-201ENST00000220429 CYP2C9P11712 490 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 XRCC5P13010 732 aaKnown RBP14.32□□□□□ -0.12
GABPB1-201ENST00000220429 ITGA4P13612 1032 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 ITGB5P18084 799 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 PFKPQ01813 784 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 PPIDQ08752 370 aaKnown RBP14.32□□□□□ -0.12
GABPB1-201ENST00000220429 DGKZQ13574 1117 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 LPIN1Q14693 890 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 EPHA7Q15375 998 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 SYCP2LQ5T4T6 812 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 MFSD5Q6N075 450 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 OTUD6AQ7L8S5 288 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 SLC7A5P1Q8MH63 180 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 GIPC3Q8TF64 312 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 PRICKLE1Q96MT3 831 aaPredicted RBP14.32□□□□□ -0.12
GABPB1-201ENST00000220429 MXRA8Q9BRK3 442 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 TRIM51Q9BSJ1 452 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 TEKT3Q9BXF9 490 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 MAK16Q9BXY0 300 aaKnown RBP14.32□□□□□ -0.12
GABPB1-201ENST00000220429 ZDHHC18Q9NUE0 388 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 QPCTLQ9NXS2 382 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 TELO2Q9Y4R8 837 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 NOX1Q9Y5S8 564 aa14.32□□□□□ -0.12
GABPB1-201ENST00000220429 EIF3DO15371 548 aaKnown RBP eCLIP14.31□□□□□ -0.12
GABPB1-201ENST00000220429 SLC16A3O15427 465 aaKnown RBP14.31□□□□□ -0.12
GABPB1-201ENST00000220429 GH1P01241 217 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 MUTP22033 750 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 ARID5AQ03989 594 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 DCAF17Q5H9S7 520 aaPredicted RBP14.31□□□□□ -0.12
GABPB1-201ENST00000220429 PASD1Q8IV76 773 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 SLC43A3Q8NBI5 491 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 IL31RAQ8NI17 732 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 CLEC4DQ8WXI8 215 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 TEPSINQ96N21 525 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 PHF12Q96QT6 1004 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 NACC1Q96RE7 527 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 PARVGQ9HBI0 331 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 RPTORQ8N122 1335 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 RASA4BC9J798 803 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 RASA4O43374 803 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 PGM3O95394 542 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 CREB1P16220 341 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 PON1P27169 355 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 HSP90AA5PQ58FG0 334 aa14.31□□□□□ -0.12
GABPB1-201ENST00000220429 METTL21CQ5VZV1 264 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms