RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 CHRM3P20309 590 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 RXRBP28702 533 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 GEMIN4P57678 1058 aaKnown RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 ZCWPW2Q504Y3 356 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 DAB2IPQ5VWQ8 1189 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 DENND1BQ6P3S1 775 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 ZNF786Q8N393 782 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 LRRC71Q8N4P6 559 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 SLC7A14Q8TBB6 771 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 RPS6KL1Q9Y6S9 549 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 SERPINI2O75830 405 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 RASA1P20936 1047 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 BRD2P25440 801 aaKnown RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 EZH2Q15910 746 aaKnown RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 RINLQ6ZS11 566 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 PPIL6Q8IXY8 311 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 C2orf69Q8N8R5 385 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 SERPINB12Q96P63 405 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 POLR1AO95602 1720 aaPredicted RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 WBP4O75554 376 aaKnown RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 HSPA1AP0DMV8 641 aaKnown RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 HSPA1BP0DMV9 641 aaKnown RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 EPHB2P29323 1055 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 CTCFP49711 727 aaPredicted RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 PTRHD1Q6GMV3 140 aaKnown RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 ELMSAN1Q6PJG2 1045 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 RIBC1Q8N443 379 aaPredicted RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 C1orf131Q8NDD1 294 aaKnown RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 USP6NLQ92738 828 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 TIPINQ9BVW5 301 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 DYRK4Q9NR20 520 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 GID8Q9NWU2 228 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 DYNC1LI2O43237 492 aaPredicted RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 SUPT7LO94864 414 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 SERPINB1P30740 379 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 TEX9Q8N6V9 391 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 CNBD2Q96M20 576 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 THUMPD3Q9BV44 507 aaKnown RBP15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 DTNAQ9Y4J8 743 aa15.6■□□□□ 0.09
NDFIP2-201ENST00000218652 LINC00854A0A1B0GVQ3 168 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 PRR23D1E9PI22 279 aaPredicted RBP15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 PRR23D2P0DMB1 279 aaPredicted RBP15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 TFE3P19532 575 aaPredicted RBP15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 KCNK10P57789 538 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 PRKCEQ02156 737 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 KCNT1Q5JUK3 1230 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 TTC39BQ5VTQ0 682 aaPredicted RBP15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 KRT35Q92764 455 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 FAM162AQ96A26 154 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 ECSITQ9BQ95 431 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 APOL5Q9BWW9 433 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 EMC2Q15006 297 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 AASDHQ4L235 1098 aaPredicted RBP15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 SBK1Q52WX2 424 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 SETD3Q86TU7 594 aaPredicted RBP15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 NIF3L1Q9GZT8 377 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 VPS33BQ9H267 617 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 SCN3BQ9NY72 215 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 EVPLLA8MZ36 301 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 CCDC142Q17RM4 750 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 SEZ6Q53EL9 994 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 WLSQ5T9L3 541 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 MEI1Q5TIA1 1274 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 ZNF512Q96ME7 567 aaPredicted RBP15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 PACSIN1Q9BY11 444 aa15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 ILKAPQ9H0C8 392 aaPredicted RBP15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 SCAF8Q9UPN6 1271 aaKnown RBP15.59■□□□□ 0.09
NDFIP2-201ENST00000218652 EFCAB14O75071 495 aa15.58■□□□□ 0.09
NDFIP2-201ENST00000218652 CD44P16070 742 aaKnown RBP15.58■□□□□ 0.09
NDFIP2-201ENST00000218652 PPP3CCP48454 512 aa15.58■□□□□ 0.09
NDFIP2-201ENST00000218652 CSE1LP55060 971 aaKnown RBP15.58■□□□□ 0.09
NDFIP2-201ENST00000218652 DEFA1P59665 94 aa15.58■□□□□ 0.09
NDFIP2-201ENST00000218652 DEFA3P59666 94 aa15.58■□□□□ 0.09
NDFIP2-201ENST00000218652 SLC44A4Q53GD3 710 aa15.58■□□□□ 0.09
NDFIP2-201ENST00000218652 KDM7AQ6ZMT4 941 aa15.58■□□□□ 0.09
NDFIP2-201ENST00000218652 BRINP3Q76B58 766 aa15.58■□□□□ 0.09
NDFIP2-201ENST00000218652 DTNBP1Q96EV8 351 aa15.58■□□□□ 0.09
NDFIP2-201ENST00000218652 VPS50Q96JG6 964 aa15.58■□□□□ 0.09
NDFIP2-201ENST00000218652 SPATA31A3Q5VYP0 1347 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 RGS5O15539 181 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 H2AFXP16104 143 aaPredicted RBP15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 ACADSP16219 412 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 KCNMA1Q12791 1236 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 WDR93Q6P2C0 686 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 TRIM65Q6PJ69 517 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 COL23A1Q86Y22 540 aaPredicted RBP15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 CALML6Q8TD86 181 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 DIS3LQ8TF46 1054 aaKnown RBP15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 ZSWIM1Q9BR11 485 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 JMJD4Q9H9V9 463 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 METTL5Q9NRN9 209 aaKnown RBP15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 CNTNAP5Q8WYK1 1306 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 TRAPPC3O43617 180 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 NQO1P15559 274 aaKnown RBP15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 GPD1P21695 349 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 ETFBP38117 255 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 CENPCQ03188 943 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 IYDQ6PHW0 289 aa15.58■□□□□ 0.08
NDFIP2-201ENST00000218652 CCDC33Q8N5R6 958 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms