RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 SETD4Q9NVD3 440 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 BRCA2P51587 3418 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 KRT10P13645 584 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 CDH5P33151 784 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 DGKDQ16760 1214 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 DENND2CQ68D51 928 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 DPH6Q7L8W6 267 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 PLEKHH3Q7Z736 793 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 C3orf20Q8ND61 904 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 UHMK1Q8TAS1 419 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 SLCO2A1Q92959 643 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 FAM49AQ9H0Q0 323 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 UNCXA6NJT0 531 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 TP73O15350 636 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 KRT1P04264 644 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 IVLP07476 585 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 NFX1Q12986 1120 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 SLC29A2Q14542 456 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 FAM110CQ1W6H9 321 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 PPP1R15BQ5SWA1 713 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 PRAMEF19Q5SWL8 479 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 SPRYD7Q5W111 196 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 SLC4A11Q8NBS3 891 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 LENG1Q96BZ8 264 aaPredicted RBP8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 ASB7Q9H672 318 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 CWC15Q9P013 229 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 NOVA2Q9UNW9 492 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 AGAP1Q9UPQ3 857 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 SMIM23A6NLE4 172 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 ITGBL1O95965 494 aaPredicted RBP8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 GAS8O95995 478 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 PTPN11Q06124 597 aaPredicted RBP8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 ODF2Q5BJF6 829 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 MFSD7Q6UXD7 560 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 HPDLQ96IR7 371 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 ACAP3Q96P50 834 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 CPXM1Q96SM3 734 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 ADPGKQ9BRR6 497 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 ELOVL4Q9GZR5 314 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 CXCL16Q9H2A7 254 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 CPA4Q9UI42 421 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 A0A1B0GUA9 196 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 MED7O43513 233 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 CAND2O75155 1236 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 CILPO75339 1184 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 RFC1P35251 1148 aaPredicted RBP8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 IRX5P78411 483 aaPredicted RBP8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 SPDYCQ5MJ68 293 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 PRUNE1Q86TP1 453 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 C2orf69Q8N8R5 385 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 JOSD2Q8TAC2 188 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 BCAS4Q8TDM0 211 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 GRK7Q8WTQ7 553 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 SLITRK1Q96PX8 696 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 SYNCQ9H7C4 482 aa8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 DNAJC17Q9NVM6 304 aaKnown RBP8.44□□□□□ -1.06
HMGXB4-201ENST00000216106 SCN1AP35498 2009 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 CEP350Q5VT06 3117 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 PAEPP09466 180 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 NUDT17P0C025 328 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 EIF3BP55884 814 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 MAGOHP61326 146 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 PTK6Q13882 451 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 SMTNL2Q2TAL5 461 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 EMC1Q8N766 993 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 ATL2Q8NHH9 583 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 KIF12Q96FN5 646 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 SNF8Q96H20 258 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 RSPH14Q9UHP6 348 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 STRIP2Q9ULQ0 834 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 M0QYV0 167 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 DYNC1LI2O43237 492 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 NPTXRO95502 500 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 HOXD8P13378 290 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 PSMA2P25787 234 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 IVDP26440 423 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 CHKAP35790 457 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 PSMC1P62191 440 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 PIGHQ14442 188 aaPredicted RBP8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 RAPGEF5Q92565 580 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 HAUS1Q96CS2 278 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 TMEM176AQ96HP8 235 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 RBM41Q96IZ5 413 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 LHX5Q9H2C1 402 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 METTL5Q9NRN9 209 aaKnown RBP8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 DPP3Q9NY33 737 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 WHRNQ9P202 907 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 TLDC2A0PJX2 215 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 RIPK2O43353 540 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 MICAL2O94851 1124 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 ERBB2P04626 1255 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 KRT3P12035 628 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 ATF2P15336 505 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 ATICP31939 592 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 LSP1P33241 339 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 ADCY8P40145 1251 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 ITGA8P53708 1063 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 FKBP1BP68106 108 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 TAP1Q03518 808 aa8.43□□□□□ -1.06
HMGXB4-201ENST00000216106 SLMAPQ14BN4 828 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms