RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 B2RBV5 119 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 BHMG1C9JSJ3 638 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 HBP1O60381 514 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 MSCO60682 206 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 EDN1P05305 212 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 DNAJB2P25686 324 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 PIK3CAP42336 1068 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 MATR3P43243 847 aaKnown RBP eCLIP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 LAMTOR4Q0VGL1 99 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 GALEQ14376 348 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 SURF1Q15526 300 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 ZNF792Q3KQV3 632 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 HSDL1Q3SXM5 330 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 TBCELQ5QJ74 424 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 ZCCHC8Q6NZY4 707 aaKnown RBP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 SNX32Q86XE0 403 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 FBXO16Q8IX29 292 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 GPRC5AQ8NFJ5 357 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 HDAC7Q8WUI4 952 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 TNKS2Q9H2K2 1166 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 GOLPH3Q9H4A6 298 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 SUGCTQ9HAC7 445 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 MED4Q9NPJ6 270 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 UVRAGQ9P2Y5 699 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 MORF4L1Q9UBU8 362 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 LCMT1Q9UIC8 334 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 NOC2LQ9Y3T9 749 aaKnown RBP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 ASAP2O43150 1006 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 FAM189A1O60320 539 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 TOM1L1O75674 476 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 VNN1O95497 513 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 MMEP08473 750 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 MYBL2P10244 700 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 TXNP10599 105 aaKnown RBP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 TNNI1P19237 187 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 TBXAS1P24557 533 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 ACOT2P49753 483 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 FKBP1BP68106 108 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 TFDP1Q14186 410 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 PPP2R5EQ16537 467 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 CLEC16AQ2KHT3 1053 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 C2orf27AQ580R0 203 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 C1orf53Q5VUE5 145 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 ACAD10Q6JQN1 1059 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 PPHLN1Q8NEY8 458 aaKnown RBP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 CHAC2Q8WUX2 184 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 ZBTB45Q96K62 511 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 NAP1L3Q99457 506 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 ACO2Q99798 780 aaKnown RBP11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 SLITRK6Q9H5Y7 841 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 PDE11AQ9HCR9 933 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 LRFN2Q9ULH4 789 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 HPCAL4Q9UM19 191 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 CNTN6Q9UQ52 1028 aa11.28□□□□□ -0.6
APOBEC3D-201ENST00000216099 PTPRJQ12913 1337 aa11.27□□□□□ -0.6
APOBEC3D-201ENST00000216099 DNA2P51530 1060 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 GTF2A2P52657 109 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 WNT7BP56706 349 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 LAMC2Q13753 1193 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 TM4SF20Q53R12 229 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 ZNF484Q5JVG2 852 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 PPP1R2P3Q6NXS1 205 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 CFAP161Q6P656 301 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 WDR49Q8IV35 697 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 TRIM11Q96F44 468 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 KRT12Q99456 494 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 NFKBIZQ9BYH8 718 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 CTTNBP2NLQ9P2B4 639 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 TSR3Q9UJK0 312 aaKnown RBP11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 PCDHB2Q9Y5E7 798 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 COL1A2P08123 1366 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 H3BQF6 201 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 OGTO15294 1046 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 PDPK1O15530 556 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 CLDN3O15551 220 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 STRNO43815 780 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 GRIN3BO60391 1043 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 PRKCBP05771 671 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 PROZP22891 400 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 ARHGAP1Q07960 439 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 DRP2Q13474 957 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 MAPK6Q16659 721 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 DDR2Q16832 855 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 TRIM72Q6ZMU5 477 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 ARMCX2Q7L311 632 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 SRLQ86TD4 932 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 FAM71BQ8TC56 605 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 SERINC2Q96SA4 455 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 ANKFY1Q9P2R3 1169 aa11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 DDX20Q9UHI6 824 aaKnown RBP11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 CDV3Q9UKY7 258 aaKnown RBP11.27□□□□□ -0.61
APOBEC3D-201ENST00000216099 CITO14578 2027 aa11.26□□□□□ -0.61
APOBEC3D-201ENST00000216099 ABLIM1O14639 778 aa11.26□□□□□ -0.61
APOBEC3D-201ENST00000216099 HEXIM1O94992 359 aaKnown RBP11.26□□□□□ -0.61
APOBEC3D-201ENST00000216099 CLTAP09496 248 aa11.26□□□□□ -0.61
APOBEC3D-201ENST00000216099 MYBL1P10243 752 aa11.26□□□□□ -0.61
APOBEC3D-201ENST00000216099 KRT5P13647 590 aa11.26□□□□□ -0.61
APOBEC3D-201ENST00000216099 ACO1P21399 889 aaKnown RBP11.26□□□□□ -0.61
APOBEC3D-201ENST00000216099 CTNNA2P26232 953 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms