RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 TRAIPQ9BWF2 469 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 LHX5Q9H2C1 402 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 CNOT10Q9H9A5 744 aaKnown RBP8.74□□□□□ -1.01
VAMP3-201ENST00000054666 KLHL11Q9NVR0 708 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 SLC5A4Q9NY91 659 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 WDR35Q9P2L0 1181 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 SIX4Q9UIU6 781 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 ITGA11Q9UKX5 1188 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 GOLGA8SH3BPF8 625 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 O00370 1275 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 EBAG9O00559 213 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 RGS16O15492 202 aaPredicted RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 RIPK2O43353 540 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 CSDE1O75534 798 aaKnown RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 MMP3P08254 477 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 PSMA2P25787 234 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 ADCY8P40145 1251 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 COPS2P61201 443 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 MAGOHP61326 146 aaKnown RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 GUCY1A3Q02108 690 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 PTPN11Q06124 597 aaPredicted RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 HADHQ16836 314 aaKnown RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 FAM110CQ1W6H9 321 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 DCAF4L1Q3SXM0 396 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 DUSP28Q4G0W2 176 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 MAP1SQ66K74 1059 aaPredicted RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 KAZNQ674X7 775 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 NIPA2Q8N8Q9 360 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 IPO4Q8TEX9 1081 aaKnown RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 MAML3Q96JK9 1138 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 MS4A4AQ96JQ5 239 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 ACAP3Q96P50 834 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 SLITRK1Q96PX8 696 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 C16orf70Q9BSU1 422 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 FAM107BQ9H098 131 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 ABHD16BQ9H3Z7 469 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 SMYD3Q9H7B4 428 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 VRTNQ9H8Y1 702 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 C2CD2Q9Y426 696 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 KAT6AQ92794 2004 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 MGAMO43451 1857 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 TCRBV5S1A1TA0A578 114 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 LRRD1A4D1F6 860 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 SRRM3A6NNA2 597 aaPredicted RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 M0QYV0 167 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 NDC80O14777 642 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 TSPAN1O60635 241 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 CILPO75339 1184 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 KRT3P12035 628 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 CCT5P48643 541 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 VPS41P49754 854 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 ITGA8P53708 1063 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 PSMC1P62191 440 aaKnown RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 RBP5P82980 135 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 BYSLQ13895 437 aaKnown RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 SLC29A2Q14542 456 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 TRIP13Q15645 432 aaPredicted RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 GPR162Q16538 588 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 PTPN20Q4JDL3 420 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 C6orf118Q5T5N4 469 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 DENND1BQ6P3S1 775 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 POLNQ7Z5Q5 900 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 PLEKHH3Q7Z736 793 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 HPDLQ96IR7 371 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 HERPUD2Q9BSE4 406 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 TINF2Q9BSI4 451 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 KATNBL1Q9H079 304 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 MIS12Q9H081 205 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 EPN3Q9H201 632 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 EPB41L4BQ9H329 900 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 SEMA4AQ9H3S1 761 aa8.73□□□□□ -1.01
VAMP3-201ENST00000054666 FAM124BQ9H5Z6 455 aaPredicted RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 GBA2Q9HCG7 927 aaPredicted RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 R3HDM2Q9Y2K5 976 aaKnown RBP8.73□□□□□ -1.01
VAMP3-201ENST00000054666 CITO14578 2027 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 TLDC2A0PJX2 215 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 RRN3P2A6NIE6 340 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 SMIM23A6NLE4 172 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 F8VP50 259 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 PI4K2BG5E9Z4 385 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 CAND2O75155 1236 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 SNAI1O95863 264 aaPredicted RBP8.72□□□□□ -1.01
VAMP3-201ENST00000054666 SHBGP04278 402 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 KRT7P08729 469 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 PTPN7P35236 360 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 RAD23BP54727 409 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 GSCP56915 257 aaPredicted RBP8.72□□□□□ -1.01
VAMP3-201ENST00000054666 ZNF252P-AS1Q0IIN9 211 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 ACVR2BQ13705 512 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 PTGISQ16647 500 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 TFDP3Q5H9I0 405 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 PPP1R15BQ5SWA1 713 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 FOXR1Q6PIV2 292 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 SPOCD1Q6ZMY3 1216 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 SRLQ86TD4 932 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 FNIP1Q8TF40 1166 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 KIF12Q96FN5 646 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 PGM2Q96G03 612 aa8.72□□□□□ -1.01
VAMP3-201ENST00000054666 TMEM176AQ96HP8 235 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms