RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Arl4cP61208 192 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 Znf112Q0VAW7 879 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 Slc9b2Q5BKR2 547 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 Zfyve28Q6ZPK7 905 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 LdhdQ7TNG8 484 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 Azin2Q8BVM4 459 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 Apol7cQ8C6E1 369 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 DnerQ8JZM4 737 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 FibpQ9JI19 357 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 Robo3Q9Z2I4 1366 aa13.58□□□□□ -0.24
Nup88-203ENSMUST00000108531 Arhgef10lA2AWP8 1280 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Gm4841E9QAA8 417 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Gm3460E9QAI8 215 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Cyp4f40G3UW81 524 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Fgf15O35622 218 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Eef1bO70251 225 aaKnown RBP13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 EpoP07321 192 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Zfp42P22227 288 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rasgrf1P27671 1262 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Gad2P48320 585 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Tbc1d10aP58802 500 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Sh3gl3Q62421 347 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Kcnk18Q6VV64 394 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Kbtbd13Q8C828 458 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Tk2Q9R088 270 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ets2P15037 468 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 M6prP24668 278 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Sstr1P30873 391 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Mmp13P33435 472 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Zbtb14Q08376 449 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 InscQ3HNM7 579 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Fam8a1Q3URQ4 399 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rcsd1Q3UZA1 412 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Spag6Q3V0U9 509 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Shroom1Q5SX79 823 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 HpseQ6YGZ1 535 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Tmem132cQ8CEF9 1099 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rhobtb2Q91V93 728 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Usp26Q99MX1 835 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Q9D2Q3 444 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Subh2bvQ9D9Z7 123 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 PodxlQ9R0M4 503 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Kif9Q9WV04 790 aa13.57□□□□□ -0.24
Nup88-203ENSMUST00000108531 Gm11549A0A286YD83 63 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Tubb1A2AQ07 451 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Oog1E9Q5G7 496 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Has3O08650 554 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 CidebO70303 219 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Cetn1P41209 172 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Myl2P51667 166 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Psmc4P54775 418 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 FerP70451 823 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Calb2Q08331 271 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 FaxcQ3UMF9 409 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rgl2Q61193 778 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Spa17Q62252 149 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Nuak1Q641K5 658 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 GnasQ6R0H7 1133 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Mapk15Q80Y86 549 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Senp7Q8BUH8 1037 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 YarsQ91WQ3 528 aaKnown RBP13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 SarnpQ9D1J3 210 aaKnown RBP13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rsrc1Q9DBU6 334 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Uts2Q9QZQ3 123 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Zgrf1Q0VGT4 1863 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Zfp275G3X904 499 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rbp3P49194 1234 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Taf1bP97358 586 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Runx2Q08775 607 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 PighQ5M9N4 188 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ripor1Q68FE6 1223 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Gpr151Q7TSN6 422 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Slc7a14Q8BXR1 771 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Slc39a13Q8BZH0 361 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Nt5c1bQ91YE9 573 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Cul2Q9D4H8 745 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Igdcc4Q9EQS9 1252 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Kifc1Q9QWT9 674 aa13.56□□□□□ -0.24
Nup88-203ENSMUST00000108531 Gm27029A2A4P4 543 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ccdc13D3YV10 709 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ccdc6D3YZP9 469 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Tada2bD3Z4Z0 420 aaKnown RBP13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Vmn2r59E9PUT5 865 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Zfp94E9Q6Y4 486 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Vti1aO89116 217 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 PkmP52480 531 aaKnown RBP13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Pla2g6P97819 807 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Gsdmc4Q3TR54 480 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Yipf3Q3UDR8 347 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Gm14685Q52KH6 695 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Luc7l3Q5SUF2 432 aaKnown RBP13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Myl6Q60605 151 aaKnown RBP13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Spata24Q6P926 205 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Kif11Q6P9P6 1052 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ssxb5Q6XAS2 159 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Chsy1Q6ZQ11 800 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Wdtc1Q80ZK9 677 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Slc4a7Q8BTY2 1034 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ap3m2Q8R2R9 418 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Cep72Q9D3R3 646 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 67.7 ms