RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Dnajb4Q9D832 337 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 TheglQ9DA15 459 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Peg12Q9WVA7 283 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Gadd45gQ9Z111 159 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Ptpn3A2ALK8 913 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Slc35g2D3YVE8 412 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Tnfaip1O70479 316 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Kcnj4P52189 445 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Rmdn3Q3UJU9 470 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Ppp4r3cQ3V0Y1 813 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Myl6Q60605 151 aaKnown RBP24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Q6GQV0 436 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Slc20a2Q80UP8 656 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Hpcal4Q8BGZ1 191 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Kank2Q8BX02 843 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Agap1Q8BXK8 857 aaKnown RBP24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Pak2Q8CIN4 524 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 MlklQ9D2Y4 472 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Ppp2r3dQ9Z176 491 aa24.03■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Col4a6B1AVK5 1691 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Lrrc74aA0A1Y7VMD6 494 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Grik3B1AS29 919 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Gm6121L7MUF1 212 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Kif3cO35066 796 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Tnnc1P19123 161 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Serpinh1P19324 417 aaKnown RBP24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Gjc1P28229 396 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Nub1P54729 614 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 March9Q3TZ87 348 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Q66JV7 365 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Arl5cQ6P068 179 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Fut11Q8BHC9 489 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Znf689Q8BKK5 500 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Elmo3Q8BYZ7 720 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 IntS13Q8QZV7 732 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Ugt2b1Q8R084 529 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 VillQ91YD6 859 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Acsl3Q9CZW4 720 aaKnown RBP24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Oxct1Q9D0K2 520 aaKnown RBP24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Rnf138rt1Q9D9M9 248 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Rfx5Q9JL61 658 aa24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Zranb2Q9R020 330 aaKnown RBP24.02■■□□□ 1.44
Scn1b-201ENSMUST00000098548 Gm8994E9PV04 411 aaKnown RBP24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Spata31d1dE9Q5W2 1247 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Mroh4G3X8W1 983 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 PrkcshO08795 521 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Pbx3O35317 434 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Stk10O55098 966 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Ifnb1P01575 182 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Cd44P15379 778 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 UrosP51163 265 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Rad54lP70270 747 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Prdx5P99029 210 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Tmem199Q5SYH2 208 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 MogsQ80UM7 834 aaKnown RBP24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Crybg3Q80W49 1005 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Olfr385Q8VGT1 312 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Spatc1lQ9D9W0 342 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Eif2ak3Q9Z2B5 1114 aa24.01■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Igkv18-36A0A075B5M9 114 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Slc4a11A2AJN7 862 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Atp2c2A7L9Z8 944 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Kdelc2G5E897 503 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Yap1P46938 488 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 RabggtbP53612 339 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Nek10Q3UGM2 1111 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Prss36Q5K2P8 849 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Lsm8Q6ZWM4 96 aaKnown RBP24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 SugctQ7TNE1 436 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Haus1Q8BHX1 278 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Socs4Q91ZA6 436 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Bbox1Q924Y0 387 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Chst12Q99LL3 419 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Ndufaf7Q9CWG8 436 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Thumpd2Q9CZB3 528 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 ToporslQ9D2F8 683 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Rasgef1cQ9D300 466 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Plxna1P70206 1894 aa24■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Gm10721J3QPJ9 223 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Bmpr1aP36895 532 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 PltpP55065 493 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Vps51Q3UVL4 782 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Tdpoz2Q717B2 364 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Olfr538Q7TRT5 310 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Amz1Q8BVF9 502 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Csnk1g3Q8C4X2 424 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 CarfQ8VHI4 689 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Erlin1Q91X78 346 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Map4k3Q99JP0 894 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Tmem86aQ9D8N3 241 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Cnot8Q9D8X5 292 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 IvdQ9JHI5 424 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Dclk1Q9JLM8 756 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Homer2Q9QWW1 354 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Birc5O70201 140 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Pgk1P09411 417 aaKnown RBP23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Smcr8Q3UMB5 935 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Mxd4Q60948 209 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Arhgap11aQ80Y19 987 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Rsl1d1Q8BVY0 452 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms