RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Supt20hQ7TT00 530 aaKnown RBP10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Vmn2r43Q80Z08 845 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Fbxo43Q8CDI2 640 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Olfr397Q8VEZ6 315 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ttc1Q91Z38 292 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tlr9Q9EQU3 1032 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 RpgrQ9R0X5 1001 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Akt3Q9WUA6 479 aa10.21□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Adamtsl1Q8BLI0 1745 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Pdzrn4E9PUZ9 1014 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rap1gds1E9Q912 607 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 CflarO35732 481 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Smyd1P97443 490 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mark2Q05512 776 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Skap1Q3UUV5 355 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tcf4Q60722 670 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Cd180Q62192 661 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Klhdc10Q6PAR0 439 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Acot5Q6Q2Z6 421 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gpr151Q7TSN6 422 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Atp6v0d2Q80SY3 350 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Znf579Q80VM4 562 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Orai2Q8BH10 250 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 3830417A13RikQ8BQJ2 303 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Q8CD60 292 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Sugp1Q8CH02 643 aaKnown RBP10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Dync1li1Q8R1Q8 523 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Pglyrp2Q8VCS0 530 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rab11fip1Q9D620 645 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Cyp39a1Q9JKJ9 470 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Abcb11Q9QY30 1321 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Bmpr2O35607 1038 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 AmhP27106 555 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 SftpdP50404 374 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ccng1P51945 294 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mmp14P53690 582 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Nub1P54729 614 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 InscQ3HNM7 579 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 SpdyaQ5IBH7 310 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Vmn2r26Q6TAC4 855 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Znf12Q7TSI0 686 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Kdm1bQ8CIG3 826 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rilpl2Q99LE1 197 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ddx56Q9D0R4 546 aaKnown RBP10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tex9Q9D845 387 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 PrphP15331 475 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Serpinh1P19324 417 aaKnown RBP10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mmp13P33435 472 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Uchl4P58321 233 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Crnkl1P63154 690 aaKnown RBP10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Casp4P70343 373 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Shroom1Q5SX79 823 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Naif1Q6PFD7 327 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rpf1Q7TND5 349 aaKnown RBP10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Olfr670Q7TRP3 312 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Q8BGC1 442 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mical2Q8BML1 960 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Slc9a9Q8BZ00 644 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Btbd9Q8C726 612 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Uroc1Q8VC12 676 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Chchd3Q9CRB9 227 aaKnown RBP10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tssk3Q9D2E1 268 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Mtcl1Q3UHU5 1945 aa10.2□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ms4a14A0A087WSD2 1232 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rgsl1H3BL40 1073 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 YwhaeP62259 255 aaKnown RBP10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Pih1d3Q3KNI6 218 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gm3414Q3TNU4 584 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Orc2Q60862 576 aaKnown RBP10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 PrcpQ7TMR0 491 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 C2cd2lQ80X80 706 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Wasf2Q8BH43 497 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 6820408C15RikQ8BJX2 354 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Dnali1Q8BVN8 258 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Slc39a13Q8BZH0 361 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Lmo3Q8BZL8 145 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Nudcd3Q8R1N4 363 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ptdss1Q99LH2 473 aaKnown RBP10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ankef1Q9D2J7 775 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Taf7lQ9D3R9 471 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Cul2Q9D4H8 745 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gtf2h1Q9DBA9 547 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Kifc1Q9QWT9 674 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Bnip3lQ9Z2F7 218 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Myh11O08638 1972 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Gm28043E0CXC2 719 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Svs3aF2Z472 265 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Srpk1O70551 648 aaKnown RBP10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Fgl2P12804 432 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ccdc117Q6PB51 277 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Ece2Q80Z60 881 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Man2a2Q8BRK9 1152 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Rhpn2Q8BWR8 686 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Bri3bpQ8BXV2 253 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Stau2Q8CJ67 570 aaKnown RBP10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Alg9Q8VDI9 611 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Tmco4Q91WU4 631 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Xpo5Q924C1 1204 aaKnown RBP10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 PawrQ925B0 333 aa10.19□□□□□ -0.78
Pcdh1-201ENSMUST00000057185 Usp26Q99MX1 835 aa10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms