RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 Kif11Q6P9P6 1052 aa11.32□□□□□ -0.6
Col9a1-201ENSMUST00000054588 6820408C15RikQ8BJX2 354 aa11.32□□□□□ -0.6
Col9a1-201ENSMUST00000054588 N4bp3Q8C7U1 537 aa11.32□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Zfp449Q8CB76 518 aa11.32□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Polr2bQ8CFI7 1174 aaKnown RBP11.32□□□□□ -0.6
Col9a1-201ENSMUST00000054588 ItpkaQ8R071 459 aa11.32□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Rassf3Q99P51 232 aa11.32□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Gm5689F6Y2A6 97 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Fgf15O35622 218 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Aars2Q14CH7 980 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Avpr1aQ62463 423 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Gpd2Q64521 727 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Frmd5Q6P5H6 517 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Ankrd45Q810N6 248 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Cdk5rap3Q99LM2 503 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Fgfr1op2Q9CRA9 253 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 IydQ9DCX8 285 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Gucy1a3Q9ERL9 691 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Arhgef10Q8C033 1345 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Myh14Q6URW6 2000 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Celf5D3Z4T1 395 aaKnown RBP11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Gm45837F7D3W5 961 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Lrrc10bG3XA50 292 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 PdgfraP26618 1089 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Atoh1P48985 351 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Smyd5Q3TYX3 416 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Tdrd5Q5VCS6 1040 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Snx19Q6P4T1 997 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Atl2Q6PA06 583 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 C2cd5Q7TPS5 1016 aaKnown RBP11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Olfr670Q7TRP3 312 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Zswim6Q80TB7 1207 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Ddx42Q810A7 929 aaKnown RBP11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Tdp1Q8BJ37 609 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Q8CD60 292 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Pde2aQ922S4 916 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Igf2bp3Q9CPN8 579 aaKnown RBP11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Chchd3Q9CRB9 227 aaKnown RBP11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Rnf135Q9CWS1 417 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Rmi1Q9D4G9 616 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Cyp39a1Q9JKJ9 470 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Cntn6Q9JMB8 1028 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Cyth1Q9QX11 398 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 S1pr4Q9Z0L1 386 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 2210011C24RikA0A087WQ89 206 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 1700031M16RikA0A087WSH0 82 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Gm21973F6WEZ7 68 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Zfp457L7N1X4 647 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 NrlP54846 237 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Grm1P97772 1199 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Abi3bpQ59IW6 1179 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 CbarpQ66L44 698 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Klhdc10Q6PAR0 439 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 VcpkmtQ8C436 228 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 RnpepQ8VCT3 650 aaKnown RBP11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 NcaldQ91X97 193 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Rpap3Q9D706 660 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 ErmapQ9JLN5 566 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Diaph3Q9Z207 1171 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Krt27Q9Z320 448 aa11.31□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Gm3371F7CQW8 167 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Per1O35973 1291 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 CfhP06909 1234 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Rab20P35295 233 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Tbx3P70324 741 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 TraddQ3U0V2 310 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Atxn7l3bQ3UD01 97 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Sult1d1Q3UZZ6 295 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Prm3Q62100 101 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Phc1Q64028 1012 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Rpp40Q8R1F9 363 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Rilpl2Q99LE1 197 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Tex9Q9D845 387 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Strn3Q9ERG2 796 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Slc22a3Q9WTW5 551 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Cib2Q9Z309 187 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Scn3aA2ASI5 1947 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Nrxn2E9Q7X7 1710 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Card9A2AIV8 536 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Slfn8B1ARD8 910 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Vmn2r15L7N2A0 855 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Ptk2P34152 1090 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 LipeP54310 759 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Rcn1Q05186 325 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Caprin2Q05A80 1031 aaKnown RBP11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Tmem63bQ3TWI9 832 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 CcnjlQ5SRT8 387 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 WlsQ6DID7 541 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 NostrinQ6WKZ7 506 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Fam185aQ7TPD2 378 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Nacc1Q7TSZ8 514 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Sun2Q8BJS4 731 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Mical2Q8BML1 960 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Olfr395Q8VGR3 312 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Rnf225Q9D7D1 332 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Fbxo16Q9QZM9 334 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Anapc7Q9WVM3 565 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Smim10l2aA0A0B4J1F8 78 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Spata31d1dE9Q5W2 1247 aa11.3□□□□□ -0.6
Col9a1-201ENSMUST00000054588 Spata31E9QAF0 1014 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms