RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Flt1P35969 1333 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gm8237E9Q257 205 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 CrymO54983 313 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 RargP18911 458 aaKnown RBP12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 CblP22682 913 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Cst8P32766 142 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Arhgap45Q3TBD2 1116 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Lman1lQ8VCD3 505 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 TbccQ8VCN9 341 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Pgs1Q8BHF7 553 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 CbsQ91WT9 561 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Bcs1lQ9CZP5 418 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Asah2Q9JHE3 756 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Kiaa1107Q80TK0 1369 aa12.42□□□□□ -0.42
Trim56-201ENSMUST00000054384 Hsf3D0VYS2 492 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Stx7O70439 261 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 LxnP70202 222 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Atp13a5Q3TYU2 1216 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Klra7Q60654 280 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Rbl2Q64700 1135 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ints2Q80UK8 1198 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Smtnl2Q8CI12 456 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ndufs3Q9DCT2 263 aaKnown RBP12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gm29554A0A087WNW4 188 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Klf6O08584 283 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 L1camP11627 1260 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Traf2P39429 501 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 PuraP42669 321 aaKnown RBP12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Oas1fQ14AZ4 364 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Disc1Q811T9 852 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Zc3h15Q3TIV5 426 aaKnown RBP12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Hist2h2acQ64523 129 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Hist2h2aa1Q6GSS7 130 aaKnown RBP12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Mettl25Q6NXH8 597 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Pex5lQ8C437 567 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Nckap1lQ8K1X4 1134 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Slf1Q8R3P9 1054 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Vps11Q91W86 941 aaKnown RBP12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gprc5dQ9JIL6 344 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Sertad1Q9JL10 236 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Rusc2Q80U22 1514 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Mms22lB1AUR6 1238 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Igfbp4P47879 254 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Lilrb4Q64281 335 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Eif2b5Q8CHW4 717 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Nrif2Q921B4 824 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ten1Q9D7K2 161 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Hoxb8P09632 243 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Bpifb5Q3UQ05 490 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Olfml2bQ3V1G4 746 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Zmym6Q8BS54 1249 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 ItchQ8C863 864 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tti1Q91V83 1085 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 CygbQ9CX80 190 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 4930513O06RikQ9D549 161 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Top3bQ9Z321 862 aaKnown RBP12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Pnldc1B2RXZ1 531 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Spin2fJ3QPU0 254 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Irf5P56477 497 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Fam183bQ5NC57 135 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Trim45Q6PFY8 580 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Tmc4Q7TQ65 694 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Atg14Q8CDJ3 492 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Eif3lQ8QZY1 564 aaKnown RBP12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Nup85Q8R480 656 aaKnown RBP12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 B3galt6Q91Z92 325 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Aldh1a3Q9JHW9 512 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Kat6aQ8BZ21 2003 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Hoxd10P28359 340 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Lins1Q3U1D0 764 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Rnf219Q8K2Y0 722 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Dkk3Q9QUN9 349 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ccne2Q9Z238 404 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ttll10A4Q9F3 704 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 CflarO35732 481 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Grem2O88273 168 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 GpiP06745 558 aaKnown RBP12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ptprn2P80560 1001 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Shcbp1lQ3TTP0 639 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Nlrp9cQ66X01 1004 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Rusc1Q8BG26 893 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Enoph1Q8BGB7 257 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Stx5Q8K1E0 355 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Acat1Q8QZT1 424 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Myoz2Q9JJW5 264 aa12.41□□□□□ -0.42
Trim56-201ENSMUST00000054384 Myo3aQ8K3H5 1613 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 Gm13084A2A8N0 494 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 CrnnD3YUU6 520 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 F830016B08RikG3UWE2 416 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 Sgo2bJ3QMK1 1167 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 Ppef2O35385 757 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 Man1a1P45700 655 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 Sult1e1P49891 295 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 Serpina5P70458 405 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 Q8BWQ6 963 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 Mrpl1Q99N96 336 aaKnown RBP12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 Htr3aP23979 487 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 HexdcQ3U4H6 486 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 Foxn3Q499D0 457 aa12.4□□□□□ -0.42
Trim56-201ENSMUST00000054384 Rmnd5aQ80YQ8 391 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms