RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Gm5591Q8CDK1 855 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 LgsnQ8CIX8 563 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Chn1Q91V57 459 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Acsl3Q9CZW4 720 aaKnown RBP24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Kif26aQ52KG5 1881 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Gm13941A2AJ38 245 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 CraddO88843 199 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Lamp2P17047 415 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Wee1P47810 646 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Capza3P70190 299 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 HmmrQ00547 794 aaKnown RBP24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Zfp658Q5PPQ4 887 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Cpa5Q8R4H4 436 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 TraipQ8VIG6 470 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Osbpl1aQ91XL9 950 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Pcyox1Q9CQF9 505 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ssr1Q9CY50 286 aaKnown RBP24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ly6dP35459 127 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Rhox5P52651 210 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Btbd1P58544 488 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 YwhaeP62259 255 aaKnown RBP24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Olfr670Q7TRP3 312 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Cyth4Q80YW0 393 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 GarsQ9CZD3 729 aaKnown RBP24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 1700123K08RikQ9D991 295 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Dnajb2Q9QYI5 324 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Mroh9G5E8L9 891 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Il27raO70394 623 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Zfp120Q8BZW4 436 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Castor2Q8CAB8 329 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 TxlnbQ8VBT1 685 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Olfr1352Q8VGX5 309 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Mob2Q8VI63 235 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Afg3l1Q920A7 789 aaKnown RBP24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ubxn1Q922Y1 297 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Rnf34Q99KR6 376 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Trap1Q9CQN1 706 aaKnown RBP24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Sept3Q9Z1S5 350 aa24.22■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Xpnpep3B7ZMP1 506 aaKnown RBP24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Vmn2r77L7N2B7 854 aa24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Nlrc4Q3UP24 1024 aa24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Atg9bQ6EBV9 922 aa24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Mpp4Q6P7F1 635 aa24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Tmem202Q80W35 275 aa24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Wdtc1Q80ZK9 677 aa24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ttc39bQ8BYY4 617 aa24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 P3h4Q8K2B0 443 aa24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Gga1Q8R0H9 635 aa24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Fbxo33Q8VE08 562 aa24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Lztfl1Q9JHQ5 299 aa24.21■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Cyp2b13A6H6J2 491 aa24.2■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Fam71aB7XG49 585 aa24.2■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Pi4k2aQ2TBE6 479 aa24.2■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ints6lQ8BND4 861 aa24.2■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Metap1Q8BP48 386 aaKnown RBP24.2■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Hook3Q8BUK6 718 aa24.2■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Zdhhc3Q8R173 299 aa24.2■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Fuca2Q99KR8 461 aa24.2■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Oxct1Q9D0K2 520 aaKnown RBP24.2■■□□□ 1.47
Upf3a-201ENSMUST00000043767 PalmdQ9JHU2 551 aa24.2■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Gm6583E9Q8Z1 469 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 PrphP15331 475 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 NsfP46460 744 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Skap1Q3UUV5 355 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Bbof1Q3V079 533 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Klra4Q60651 263 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Arhgap10Q6Y5D8 786 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Tdpoz2Q717B2 364 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Spata7Q80VP2 582 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Haus1Q8BHX1 278 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Rassf10Q8BL43 508 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 ClasrpQ8CFC7 668 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Adgrg2Q8CJ12 1009 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Cfap57Q9D180 1249 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Baz2bA2AUY4 2123 aa24.2■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Mindy4b-psA0A1W2P7H6 457 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Gm8994E9PV04 411 aaKnown RBP24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Mroh4G3X8W1 983 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Cd72P21855 354 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Ercc5P35689 1170 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Cetn1P41209 172 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Cul4aQ3TCH7 759 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Arhgap11aQ80Y19 987 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Slc2a12Q8BFW9 622 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 H6pdQ8CFX1 789 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Mms19Q9D071 1031 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Mkrn2Q9ERV1 416 aaKnown RBP24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Cep350E9Q309 3095 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Gm8369E9PZI3 166 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Dpysl4O35098 572 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Adam19O35674 920 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Ifnb1P01575 182 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Lmo2P25801 158 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 UrosP51163 265 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Vps51Q3UVL4 782 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Zfyve28Q6ZPK7 905 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 PolrmtQ8BKF1 1207 aaKnown RBP24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Unc45bQ8CGY6 931 aaKnown RBP24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Nxnl2Q9D531 156 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Cnot8Q9D8X5 292 aa24.19■■□□□ 1.46
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms