RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Vwa3aQ3UVV9 1148 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Prr7Q3V0I2 269 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Stxbp2Q64324 593 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 LdhdQ7TNG8 484 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Slitrk3Q810B9 980 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Efr3aQ8BG67 819 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Tarsl2Q8BLY2 790 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Klhl31Q8BWA5 634 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Mrgprx1Q8CIP3 322 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Kbtbd4Q8R179 534 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Cyp4f16Q99N17 524 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Tbx18Q9EPZ6 613 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 PtsQ9R1Z7 144 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 JcadQ5DTX6 1320 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Gm8267E9Q207 261 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Anxa8O35640 327 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Nr1d2Q60674 576 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Tnfaip2Q61333 691 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Epb41l5Q8BGS1 731 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Smndc1Q8BGT7 238 aaKnown RBP17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 ClmnQ8C5W0 1052 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Bag5Q8CI32 447 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Asb2Q8K0L0 634 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Emc3Q99KI3 261 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 St7Q99M96 577 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Ddx56Q9D0R4 546 aaKnown RBP17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Styxl1Q9DAR2 321 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Mdc1Q5PSV9 1707 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Ssc5dQ8BV57 1371 aa17.43■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Krt83E9Q1Y9 479 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Gm3424L7N298 263 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Gm8246M0QWX9 263 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Stx7O70439 261 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 SfnO70456 248 aaKnown RBP17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 P01734 135 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 PdgfraP26618 1089 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Atp9bP98195 1146 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 ItkQ03526 625 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Gcnt1Q09324 428 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Chrna5Q2MKA5 467 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 TbataQ7TSD4 393 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Aldh3b1Q80VQ0 468 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 P2ry10Q8BFU7 328 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 SowahdQ8BY98 327 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Dgcr8Q9EQM6 773 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 PtproE9Q612 1226 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 NficP70255 439 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Catsper4Q8BVN3 442 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Vmn1r218Q8R261 298 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Ttc8Q8VD72 515 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Ppp1r2Q9DCL8 206 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Dnal1Q05A62 190 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Grm4Q68EF4 912 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Arhgap25Q8BYW1 648 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Gpsm2Q8VDU0 679 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 TraipQ8VIG6 470 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Tlr3Q99MB1 905 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Gpatch1Q9DBM1 930 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Tjp2Q9Z0U1 1167 aaKnown RBP17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Phf11A6H5X4 337 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Prl2c3P04768 224 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Tlr8P58682 1032 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Eif2s1Q6ZWX6 315 aaKnown RBP17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Rims2Q9EQZ7 1530 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Ifit3bE9PV48 403 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Arid5aQ3U108 590 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Lrrc8bQ5DU41 803 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Nup93Q8BJ71 819 aaKnown RBP17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Fbxl13Q8CDU4 790 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Ddx18Q8K363 660 aaKnown RBP17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Tomm70Q9CZW5 611 aa17.42■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Gm3739L7N296 216 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Npy5rO70342 466 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Aoc3O70423 765 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Cdh2P15116 906 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Tmem35bQ3U0Y2 150 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Agap2Q3UHD9 1186 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Rpf1Q7TND5 349 aaKnown RBP17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Atp6v0d2Q80SY3 350 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Pkn3Q8K045 878 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Cpa5Q8R4H4 436 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Epm2aip1Q8VEH5 606 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Plagl2Q925T4 496 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Hebp1Q9R257 190 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Scgb2b19J3QM75 112 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Ifnb1P01575 182 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Tbc1d10aP58802 500 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Snai1Q02085 264 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Wdr41Q3UDP0 460 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Nr1h2Q60644 446 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Q8BGD0 127 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Zhx2Q8C0C0 836 aaKnown RBP17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 MtrrQ8C1A3 696 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Trub2Q91WG3 331 aaKnown RBP17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Ccdc81Q9D5W4 654 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Scgb2b12S4R2L0 112 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Klhl32A2AJX0 620 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Chrm1P12657 460 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Kcna2P63141 499 aa17.41■□□□□ 0.38
Col17a1-201ENSMUST00000026045 Cfap52Q5F201 620 aa17.41■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms