RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Chil3O35744 398 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 PolgP54099 1218 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Naa20P61600 178 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Samd11Q1RNF8 542 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 MpndQ3TV65 487 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Nr1h2Q60644 446 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cnot7Q60809 285 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Pick1Q62083 416 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Npdc1Q64322 332 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Zbed4Q80WQ9 1168 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mettl13Q91YR5 698 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Trim13Q9CYB0 407 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tm9sf1Q9DBU0 606 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Rbck1Q9WUB0 508 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Dctn3Q9Z0Y1 186 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 B020011L13RikA0A087WQI7 412 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tada2bD3Z4Z0 420 aaKnown RBP9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm8113E0CXS8 587 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Sec22bO08547 215 aaKnown RBP9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Pold2O35654 469 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Scd1P13516 355 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 NfibP97863 570 aaKnown RBP9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Atp13a5Q3TYU2 1216 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 4933427I04RikQ3V053 235 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Islr2Q5RKR3 745 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Slitrk1Q810C1 696 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Elmo2Q8BHL5 732 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Efl1Q8C0D5 1127 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Unc5bQ8K1S3 945 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Clptm1Q8VBZ3 664 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gabbr1Q9WV18 960 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gm20911A0A087WSS0 222 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Axin1O35625 863 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cd19P25918 547 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Cdc25cP48967 447 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 PkmP52480 531 aaKnown RBP9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 NcstnP57716 708 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 S100a13P97352 98 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tekt4Q149S1 447 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Armcx5Q3UZB0 606 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Fbxo39Q5NBU5 443 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ccdc85aQ5SP85 500 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 FAM120AQ6A0A9 1112 aaKnown RBP9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Q6DFW0 481 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ints2Q80UK8 1198 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Kcns3Q8BQZ8 491 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tbc1d22aQ8R5A6 516 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 NcaldQ91X97 193 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 MbipQ99LQ1 341 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mrpl1Q99N96 336 aaKnown RBP9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mrto4Q9D0I8 239 aaKnown RBP9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 LrmdaQ9D9B4 229 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Kat2bQ9JHD1 813 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Smok2bQ9QYZ3 484 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Smok2aQ9QYZ6 504 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Hebp1Q9R257 190 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Flt4P35917 1363 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Osbpl7A2A716 963 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Spata31E9QAF0 1014 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Sema4dO09126 861 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mt-CybP00158 381 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Pgk2P09041 417 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Capza2P47754 286 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tmprss15P97435 1069 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Tatdn3Q3U1C6 294 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Exoc3l4Q6DIA2 721 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Olfr698Q7TRN4 311 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Caap1Q8VDY9 356 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Far1Q922J9 515 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gpr63Q9EQQ3 425 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Prkab1Q9R078 270 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Lmo7E9PYF4 1699 aaKnown RBP9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Zfyve9A2A8R0 1397 aa9.53□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Pde6bP23440 856 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 CstaP56567 97 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mapre3Q6PER3 281 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 AgpsQ8C0I1 645 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Mill1Q8HWE7 395 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Oas1dQ8VI95 361 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Prmt7Q922X9 692 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Ift46Q9DB07 301 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Aldh1a3Q9JHW9 512 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 MkksQ9JI70 570 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Sgpp1Q9JI99 430 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Gprc5dQ9JIL6 344 aa9.52□□□□□ -0.88
Ccdc47-201ENSMUST00000002043 Kcnh4A2A5F7 1018 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 F830016B08RikG3UWE2 416 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Surf2P09926 257 aaKnown RBP9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Usp4P35123 962 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Chp1P61022 195 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mark2Q05512 776 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 MlxipQ2VPU4 917 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gadl1Q80WP8 550 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Camkk2Q8C078 588 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Prpf39Q8K2Z2 665 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Akr1c14Q91WT7 323 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Sf3b3Q921M3 1217 aaKnown RBP9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Psmd9Q9CR00 222 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Bbs2Q9CWF6 721 aa9.52□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Lrrc17Q9CXD9 443 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms