RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	SPC25	P40014	221 aa		2.93	□□□□□ -1.94
CMR3	YPR013C	YJR015W	P47090	510 aa		2.93	□□□□□ -1.94
CMR3	YPR013C	YNR077C	P53758	84 aa		2.93	□□□□□ -1.94
CMR3	YPR013C	FYV12	Q08559	129 aa		2.93	□□□□□ -1.94
CMR3	YPR013C	EMC6	Q12431	108 aa		2.93	□□□□□ -1.94
CMR3	YPR013C	ATG40	Q99325	256 aa		2.93	□□□□□ -1.94
CMR3	YPR013C	ATP5	P09457	212 aa		2.92	□□□□□ -1.94
CMR3	YPR013C	SFK1	P35735	353 aa		2.92	□□□□□ -1.94
CMR3	YPR013C	PHO88	P38264	188 aa	Predicted RBP	2.92	□□□□□ -1.94
CMR3	YPR013C	FYV4	P38783	130 aa	Predicted RBP	2.92	□□□□□ -1.94
CMR3	YPR013C	YNL217W	P40152	326 aa		2.92	□□□□□ -1.94
CMR3	YPR013C	YGR201C	P42936	225 aa		2.92	□□□□□ -1.94
CMR3	YPR013C	RBL2	P48606	106 aa	Known RBP	2.92	□□□□□ -1.94
CMR3	YPR013C	BOL2	P53082	120 aa		2.92	□□□□□ -1.94
CMR3	YPR013C	VPS28	Q02767	242 aa		2.92	□□□□□ -1.94
CMR3	YPR013C	DIG2	Q03373	323 aa	Known RBP	2.92	□□□□□ -1.94
CMR3	YPR013C	GAL83	Q04739	417 aa		2.92	□□□□□ -1.94
CMR3	YPR013C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.92	□□□□□ -1.94	not detected
CMR3	YPR013C	TAF2	P23255	1407 aa		2.92	□□□□□ -1.94
CMR3	YPR013C	YOR062C	P36025	268 aa		2.91	□□□□□ -1.94
CMR3	YPR013C	TVP23	P38962	199 aa		2.91	□□□□□ -1.94
CMR3	YPR013C	DAD3	P69850	94 aa		2.91	□□□□□ -1.94
CMR3	YPR013C	YKR005C	Q02203	525 aa		2.91	□□□□□ -1.94
CMR3	YPR013C	YMR253C	Q04835	414 aa		2.91	□□□□□ -1.94
CMR3	YPR013C	ATP20	Q12233	115 aa		2.91	□□□□□ -1.94
CMR3	YPR013C	HSP30	P25619	332 aa		2.9	□□□□□ -1.95
CMR3	YPR013C	FZF1	P32805	299 aa		2.9	□□□□□ -1.95
CMR3	YPR013C	YBR209W	P38311	105 aa		2.9	□□□□□ -1.95
CMR3	YPR013C	YBR220C	P38318	560 aa		2.9	□□□□□ -1.95
CMR3	YPR013C	YJL027C	P47063	138 aa	Predicted RBP	2.9	□□□□□ -1.95
CMR3	YPR013C	CCC1	P47818	322 aa		2.9	□□□□□ -1.95
CMR3	YPR013C	YLR236C	A0A023PZG4	107 aa		2.89	□□□□□ -1.95
CMR3	YPR013C	RAD6	P06104	172 aa		2.89	□□□□□ -1.95
CMR3	YPR013C	SCL1	P21243	252 aa	Known RBP	2.89	□□□□□ -1.95
CMR3	YPR013C	PAM17	P36147	197 aa		2.89	□□□□□ -1.95
CMR3	YPR013C	SVP26	P38869	228 aa		2.89	□□□□□ -1.95
CMR3	YPR013C	YPL073C	P40323	161 aa		2.89	□□□□□ -1.95
CMR3	YPR013C	YFR054C	P43622	192 aa		2.89	□□□□□ -1.95
CMR3	YPR013C	FIP1	P45976	327 aa		2.89	□□□□□ -1.95
CMR3	YPR013C	ERG25	P53045	309 aa		2.89	□□□□□ -1.95
CMR3	YPR013C	RAS2	P01120	322 aa	Known RBP	2.88	□□□□□ -1.95
CMR3	YPR013C	MIX17	Q03667	156 aa		2.88	□□□□□ -1.95
CMR3	YPR013C	CSN9	Q03981	162 aa		2.88	□□□□□ -1.95
CMR3	YPR013C	YMR320W	Q04897	101 aa		2.88	□□□□□ -1.95
CMR3	YPR013C	YPD1	Q07688	167 aa		2.88	□□□□□ -1.95
CMR3	YPR013C	IRC23	Q08416	157 aa		2.88	□□□□□ -1.95
CMR3	YPR013C	TRM3	Q07527	1436 aa		2.87	□□□□□ -1.95
CMR3	YPR013C	PTC1	P35182	281 aa		2.87	□□□□□ -1.95
CMR3	YPR013C	RRT1	P38192	103 aa		2.87	□□□□□ -1.95
CMR3	YPR013C	YHR022C	P38763	256 aa		2.87	□□□□□ -1.95
CMR3	YPR013C	GRX5	Q02784	150 aa		2.87	□□□□□ -1.95
CMR3	YPR013C	YDR391C	Q04170	232 aa		2.87	□□□□□ -1.95
CMR3	YPR013C	CUE4	Q04201	117 aa	Predicted RBP	2.87	□□□□□ -1.95
CMR3	YPR013C	HRT1	Q08273	121 aa		2.87	□□□□□ -1.95
CMR3	YPR013C	YEL028W	P39989	153 aa		2.86	□□□□□ -1.95
CMR3	YPR013C	YER181C	P40097	107 aa		2.86	□□□□□ -1.95
CMR3	YPR013C	AGE2	P40529	298 aa		2.86	□□□□□ -1.95
CMR3	YPR013C	YNL033W	P53964	284 aa		2.86	□□□□□ -1.95
CMR3	YPR013C	CYT2	Q00873	224 aa		2.86	□□□□□ -1.95
CMR3	YPR013C	SYM1	Q06563	197 aa		2.86	□□□□□ -1.95
CMR3	YPR013C	PST2	Q12335	198 aa	Known RBP	2.86	□□□□□ -1.95
CMR3	YPR013C	PHO85	P17157	305 aa		2.85	□□□□□ -1.95
CMR3	YPR013C	HTD2	P38790	280 aa	Known RBP	2.85	□□□□□ -1.95
CMR3	YPR013C	GAA1	P39012	614 aa		2.85	□□□□□ -1.95
CMR3	YPR013C	YER135C	P40082	130 aa		2.85	□□□□□ -1.95
CMR3	YPR013C	RIO2	P40160	425 aa	Known RBP	2.85	□□□□□ -1.95
CMR3	YPR013C	PHB1	P40961	287 aa		2.85	□□□□□ -1.95
CMR3	YPR013C	YGL193C	P53097	103 aa		2.85	□□□□□ -1.95
CMR3	YPR013C	SAY1	P53324	424 aa		2.85	□□□□□ -1.95
CMR3	YPR013C	HRD1	Q08109	551 aa		2.85	□□□□□ -1.95
CMR3	YPR013C	RAD28	Q12021	506 aa		2.85	□□□□□ -1.95
CMR3	YPR013C	RIB3	Q99258	208 aa		2.85	□□□□□ -1.95
CMR3	YPR013C	MET5	P47169	1442 aa		2.85	□□□□□ -1.95
CMR3	YPR013C	DDI2	P0CH63	225 aa		2.84	□□□□□ -1.95
CMR3	YPR013C	DDI3	P0CH64	225 aa		2.84	□□□□□ -1.95
CMR3	YPR013C	TFC1	P32367	649 aa		2.84	□□□□□ -1.95
CMR3	YPR013C	YDR366C	P87287	132 aa		2.84	□□□□□ -1.95
CMR3	YPR013C	COF1	Q03048	143 aa	Known RBP	2.84	□□□□□ -1.95
CMR3	YPR013C	YLR361C-A	Q3E795	98 aa		2.84	□□□□□ -1.95
CMR3	YPR013C	UTR5	P32630	166 aa		2.83	□□□□□ -1.96
CMR3	YPR013C	FAS1	P07149	2051 aa	Known RBP	2.82	□□□□□ -1.96
CMR3	YPR013C	SEC11	P15367	167 aa		2.82	□□□□□ -1.96
CMR3	YPR013C	RPC19	P28000	142 aa	Known RBP	2.82	□□□□□ -1.96
CMR3	YPR013C	SUA7	P29055	345 aa	Predicted RBP	2.82	□□□□□ -1.96
CMR3	YPR013C	VMA22	P38784	181 aa		2.82	□□□□□ -1.96
CMR3	YPR013C	YEL073C	P39974	107 aa		2.82	□□□□□ -1.96
CMR3	YPR013C	KNH1	P50112	268 aa		2.82	□□□□□ -1.96
CMR3	YPR013C	HHO1	P53551	258 aa		2.82	□□□□□ -1.96
CMR3	YPR013C	UBC7	Q02159	165 aa		2.82	□□□□□ -1.96
CMR3	YPR013C	CGI121	Q03705	181 aa	Known RBP	2.82	□□□□□ -1.96
CMR3	YPR013C	YPR013C	Q12145	317 aa		2.82	□□□□□ -1.96
CMR3	YPR013C	YGR039W	P53225	103 aa		2.81	□□□□□ -1.96
CMR3	YPR013C	POP3	P53833	195 aa	Predicted RBP	2.81	□□□□□ -1.96
CMR3	YPR013C	LIP1	Q03579	150 aa		2.81	□□□□□ -1.96
CMR3	YPR013C	YDR102C	Q03864	110 aa		2.81	□□□□□ -1.96
CMR3	YPR013C	YPR174C	Q06616	221 aa	Predicted RBP	2.81	□□□□□ -1.96
CMR3	YPR013C	YOR381W-A	Q3E804	55 aa		2.81	□□□□□ -1.96
CMR3	YPR013C	PHO13	P19881	312 aa		2.8	□□□□□ -1.96
CMR3	YPR013C	SPT14	P32363	452 aa		2.8	□□□□□ -1.96
CMR3	YPR013C	MRPL24	P36525	258 aa	Predicted RBP	2.8	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms