RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeast

Gene DDI3, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDI3	YNL335W	EHD3	P28817	500 aa		2.71	□□□□□ -1.98
DDI3	YNL335W	MGM101	P32787	269 aa	Known RBP	2.71	□□□□□ -1.98
DDI3	YNL335W	PAU24	P38155	120 aa		2.71	□□□□□ -1.98
DDI3	YNL335W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
DDI3	YNL335W	GIM4	P40005	111 aa	Known RBP	2.71	□□□□□ -1.98
DDI3	YNL335W	RFC4	P40339	323 aa	Known RBP	2.71	□□□□□ -1.98
DDI3	YNL335W	APQ12	P40532	138 aa		2.71	□□□□□ -1.98
DDI3	YNL335W	PAM16	P42949	149 aa		2.71	□□□□□ -1.98
DDI3	YNL335W	AIM25	P47140	327 aa		2.71	□□□□□ -1.98
DDI3	YNL335W	BAT2	P47176	376 aa	Known RBP	2.71	□□□□□ -1.98
DDI3	YNL335W	RAD17	P48581	401 aa		2.71	□□□□□ -1.98
DDI3	YNL335W	RPL26B	P53221	127 aa	Known RBP	2.71	□□□□□ -1.98
DDI3	YNL335W	PAU12	P53343	120 aa		2.71	□□□□□ -1.98
DDI3	YNL335W	PGA1	P53896	198 aa		2.71	□□□□□ -1.98
DDI3	YNL335W	RHO3	Q00245	231 aa	Known RBP	2.71	□□□□□ -1.98
DDI3	YNL335W	CTF19	Q02732	369 aa		2.71	□□□□□ -1.98
DDI3	YNL335W	SPC3	Q12133	184 aa		2.71	□□□□□ -1.98
DDI3	YNL335W	PSF1	Q12488	208 aa		2.71	□□□□□ -1.98
DDI3	YNL335W	ARG80	P07249	177 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	YOL162W	P0CF19	215 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	SEC22	P22214	214 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	DOA4	P32571	926 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	ECM31	P38122	312 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	YBR096W	P38256	230 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	YGP1	P38616	354 aa	Known RBP	2.7	□□□□□ -1.98
DDI3	YNL335W	COS8	P38723	381 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	MED6	P38782	295 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	NSG1	P38837	291 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	CAT5	P41735	233 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	PRM10	P42946	383 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	YJL016W	P47072	561 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	DSK2	P48510	373 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	DOC1	P53068	250 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	YGL034C	P53186	121 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	YMR252C	Q04814	134 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	YMR315W	Q04869	349 aa	Known RBP	2.7	□□□□□ -1.98
DDI3	YNL335W	DCR2	Q05924	578 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	RDS3	Q06835	107 aa	Predicted RBP	2.7	□□□□□ -1.98
DDI3	YNL335W	RDI1	Q12434	202 aa		2.7	□□□□□ -1.98
DDI3	YNL335W	REP2	P03872	296 aa		2.69	□□□□□ -1.98
DDI3	YNL335W	ADK1	P07170	222 aa	Known RBP	2.69	□□□□□ -1.98
DDI3	YNL335W	MRP17	P28778	131 aa		2.69	□□□□□ -1.98
DDI3	YNL335W	SRB6	P32570	121 aa		2.69	□□□□□ -1.98
DDI3	YNL335W	PAU2	P32612	120 aa		2.69	□□□□□ -1.98
DDI3	YNL335W	SRY1	P36007	326 aa		2.69	□□□□□ -1.98
DDI3	YNL335W	YGL101W	P53144	215 aa		2.69	□□□□□ -1.98
DDI3	YNL335W	SAY1	P53324	424 aa		2.69	□□□□□ -1.98
DDI3	YNL335W	KEI1	Q06346	221 aa		2.69	□□□□□ -1.98
DDI3	YNL335W	MSB2	P32334	1306 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	COX9	P07255	59 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	ADE1	P27616	306 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	CLB6	P32943	380 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	TIF34	P40217	347 aa	Known RBP	2.68	□□□□□ -1.98
DDI3	YNL335W	BMT5	P40493	336 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	GLR1	P41921	483 aa	Known RBP	2.68	□□□□□ -1.98
DDI3	YNL335W	MCM22	P47167	239 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	SNN1	P48232	102 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	YGL159W	P53110	370 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	HHO1	P53551	258 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	RGM1	Q00453	211 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	YLR179C	Q06252	201 aa	Known RBP	2.68	□□□□□ -1.98
DDI3	YNL335W	YPR127W	Q06494	345 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	ANT1	Q06497	328 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	YOR289W	Q12012	251 aa	Predicted RBP	2.68	□□□□□ -1.98
DDI3	YNL335W	LSO2	Q3E772	92 aa	Known RBP	2.68	□□□□□ -1.98
DDI3	YNL335W	VMA9	Q3E7B6	73 aa		2.68	□□□□□ -1.98
DDI3	YNL335W	SGA1	P08019	549 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	ERG24	P32462	438 aa	Known RBP	2.67	□□□□□ -1.98
DDI3	YNL335W	GCV3	P39726	170 aa	Predicted RBP	2.67	□□□□□ -1.98
DDI3	YNL335W	ICE2	P40499	491 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	PHB1	P40961	287 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	OST2	P46964	130 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	MOG1	P47123	218 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	CGR1	P53188	120 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	YGR026W	P53217	278 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	YGR042W	P53227	271 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	GIM3	P53900	129 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	NMA1	Q06178	401 aa	Known RBP	2.67	□□□□□ -1.98
DDI3	YNL335W	ATG10	Q07879	167 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	ZEO1	Q08245	113 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	YOR186W	Q08560	144 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	VPS68	Q12016	184 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	PCC1	Q3E833	88 aa		2.67	□□□□□ -1.98
DDI3	YNL335W	PUT1	P09368	476 aa		2.66	□□□□□ -1.98
DDI3	YNL335W	EMP24	P32803	203 aa	Known RBP	2.66	□□□□□ -1.98
DDI3	YNL335W	MSN4	P33749	630 aa		2.66	□□□□□ -1.98
DDI3	YNL335W	SFK1	P35735	353 aa		2.66	□□□□□ -1.98
DDI3	YNL335W	YOR062C	P36025	268 aa		2.66	□□□□□ -1.98
DDI3	YNL335W	IKI1	P38874	309 aa		2.66	□□□□□ -1.98
DDI3	YNL335W	YJR111C	P47148	283 aa	Known RBP	2.66	□□□□□ -1.98
DDI3	YNL335W	YJR146W	P47174	117 aa		2.66	□□□□□ -1.98
DDI3	YNL335W	NRK1	P53915	240 aa		2.66	□□□□□ -1.98
DDI3	YNL335W	NOC4	Q06512	552 aa	Predicted RBP	2.66	□□□□□ -1.98
DDI3	YNL335W	YOR385W	Q08909	290 aa		2.66	□□□□□ -1.98
DDI3	YNL335W	TOM1	Q03280	3268 aa		2.66	□□□□□ -1.98
DDI3	YNL335W	MDM35	O60200	86 aa		2.65	□□□□□ -1.99
DDI3	YNL335W	UBI4	P0CG63	381 aa	Known RBP	2.65	□□□□□ -1.99
DDI3	YNL335W	RPL40A	P0CH08	128 aa	Known RBP	2.65	□□□□□ -1.99
DDI3	YNL335W	RPL40B	P0CH09	128 aa	Known RBP	2.65	□□□□□ -1.99
DDI3	YNL335W	SUI1	P32911	108 aa	Known RBP	2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms