RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W YER188WP40103 239 aa3.27□□□□□ -1.89
TFA1YKL028W LDB18Q07887 179 aa3.27□□□□□ -1.89
TFA1YKL028W SPC3Q12133 184 aa3.27□□□□□ -1.89
TFA1YKL028W YLR099W-AQ3E798 87 aa3.27□□□□□ -1.89
TFA1YKL028W SRP21P32342 167 aa3.27□□□□□ -1.89
TFA1YKL028W HYM1P32464 399 aa3.27□□□□□ -1.89
TFA1YKL028W SHB17P36136 271 aaKnown RBP3.27□□□□□ -1.89
TFA1YKL028W RGI1P40043 161 aaPredicted RBP3.27□□□□□ -1.89
TFA1YKL028W GVP36P40531 326 aaKnown RBP3.27□□□□□ -1.89
TFA1YKL028W ECO1P43605 281 aa3.27□□□□□ -1.89
TFA1YKL028W YFR045WP43617 309 aa3.27□□□□□ -1.89
TFA1YKL028W YDR274CP87283 123 aa3.27□□□□□ -1.89
TFA1YKL028W YMR099CQ03161 297 aaKnown RBP3.27□□□□□ -1.89
TFA1YKL028W ATO3Q12359 275 aa3.27□□□□□ -1.89
TFA1YKL028W RPS19AP07280 144 aaKnown RBP3.26□□□□□ -1.89
TFA1YKL028W RPS19BP07281 144 aaPredicted RBP3.26□□□□□ -1.89
TFA1YKL028W YBR220CP38318 560 aa3.26□□□□□ -1.89
TFA1YKL028W CTR2P38865 189 aa3.26□□□□□ -1.89
TFA1YKL028W GON7P46984 123 aa3.26□□□□□ -1.89
TFA1YKL028W AIF1P52923 378 aa3.26□□□□□ -1.89
TFA1YKL028W YGL260WP53056 76 aa3.26□□□□□ -1.89
TFA1YKL028W YGL193CP53097 103 aa3.26□□□□□ -1.89
TFA1YKL028W YGR017WP53210 297 aa3.26□□□□□ -1.89
TFA1YKL028W YGR026WP53217 278 aa3.26□□□□□ -1.89
TFA1YKL028W GIS2P53849 153 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89 RIP-Chip
TFA1YKL028W YPL225WQ08971 146 aaKnown RBP3.26□□□□□ -1.89
TFA1YKL028W FYV7Q12247 151 aa3.26□□□□□ -1.89
TFA1YKL028W YNL277W-AQ3E7Z0 62 aa3.26□□□□□ -1.89
TFA1YKL028W FKS1P38631 1876 aaKnown RBP3.25□□□□□ -1.89
TFA1YKL028W PHO13P19881 312 aa3.25□□□□□ -1.89
TFA1YKL028W GSP1P32835 219 aaKnown RBP3.25□□□□□ -1.89
TFA1YKL028W GSP2P32836 220 aaKnown RBP3.25□□□□□ -1.89
TFA1YKL028W YRA2P36036 203 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
TFA1YKL028W HTD2P38790 280 aaKnown RBP3.25□□□□□ -1.89
TFA1YKL028W YHR140WP38842 239 aa3.25□□□□□ -1.89
TFA1YKL028W YJL218WP40892 196 aaKnown RBP3.25□□□□□ -1.89
TFA1YKL028W YNL033WP53964 284 aa3.25□□□□□ -1.89
TFA1YKL028W YNL019CP53975 284 aa3.25□□□□□ -1.89
TFA1YKL028W MRPS8Q03799 155 aa3.25□□□□□ -1.89
TFA1YKL028W GAL83Q04739 417 aa3.25□□□□□ -1.89
TFA1YKL028W FYV12Q08559 129 aa3.25□□□□□ -1.89
TFA1YKL028W YOR289WQ12012 251 aaPredicted RBP3.25□□□□□ -1.89
TFA1YKL028W SAS5Q99314 248 aa3.25□□□□□ -1.89
TFA1YKL028W HIS3P06633 220 aa3.24□□□□□ -1.89
TFA1YKL028W YHR032W-AP0C5N6 59 aa3.24□□□□□ -1.89
TFA1YKL028W NMT1P14743 455 aa3.24□□□□□ -1.89
TFA1YKL028W YCR101CP25607 182 aa3.24□□□□□ -1.89
TFA1YKL028W LHP1P33399 275 aaKnown RBP3.24□□□□□ -1.89
TFA1YKL028W UMP1P38293 148 aa3.24□□□□□ -1.89
TFA1YKL028W NSA2P40078 261 aaKnown RBP3.24□□□□□ -1.89
TFA1YKL028W SMD3P43321 101 aaKnown RBP3.24□□□□□ -1.89
TFA1YKL028W YDR391CQ04170 232 aa3.24□□□□□ -1.89
TFA1YKL028W YOR268CQ08734 132 aa3.24□□□□□ -1.89
TFA1YKL028W BOL1Q3E793 110 aa3.24□□□□□ -1.89
TFA1YKL028W TOP2P06786 1428 aaKnown RBP3.23□□□□□ -1.89
TFA1YKL028W POR1P04840 283 aaKnown RBP3.23□□□□□ -1.89
TFA1YKL028W NSP1P14907 823 aaKnown RBP3.23□□□□□ -1.89
TFA1YKL028W SUI1P32911 108 aaKnown RBP3.23□□□□□ -1.89
TFA1YKL028W YKR005CQ02203 525 aa3.23□□□□□ -1.89
TFA1YKL028W VPS28Q02767 242 aa3.23□□□□□ -1.89
TFA1YKL028W YPR114WQ06107 315 aa3.23□□□□□ -1.89
TFA1YKL028W YLR118CQ12354 227 aa3.23□□□□□ -1.89
TFA1YKL028W AHT1P29589 182 aa3.22□□□□□ -1.89
TFA1YKL028W YHL026CP38740 315 aa3.22□□□□□ -1.89
TFA1YKL028W SPC25P40014 221 aa3.22□□□□□ -1.89
TFA1YKL028W SFT1P43682 97 aa3.22□□□□□ -1.89
TFA1YKL028W SBH1P52870 82 aa3.22□□□□□ -1.89
TFA1YKL028W SCW10Q04951 389 aa3.22□□□□□ -1.89
TFA1YKL028W PIN3Q06449 215 aa3.22□□□□□ -1.89
TFA1YKL028W SYM1Q06563 197 aa3.22□□□□□ -1.89
TFA1YKL028W ATP20Q12233 115 aa3.22□□□□□ -1.89
TFA1YKL028W MSW1P04803 379 aa3.21□□□□□ -1.9
TFA1YKL028W RAD6P06104 172 aa3.21□□□□□ -1.9
TFA1YKL028W ADK1P07170 222 aaKnown RBP3.21□□□□□ -1.9
TFA1YKL028W SNC2P33328 115 aa3.21□□□□□ -1.9
TFA1YKL028W MID2P36027 376 aa3.21□□□□□ -1.9
TFA1YKL028W RPL14AP36105 138 aaKnown RBP3.21□□□□□ -1.9
TFA1YKL028W RPL14BP38754 138 aaKnown RBP3.21□□□□□ -1.9
TFA1YKL028W YNR062CP53748 327 aa3.21□□□□□ -1.9
TFA1YKL028W AIM11P87275 137 aa3.21□□□□□ -1.9
TFA1YKL028W EST3Q03096 181 aa3.21□□□□□ -1.9
TFA1YKL028W AIM36Q03798 255 aa3.21□□□□□ -1.9
TFA1YKL028W YTH1Q06102 208 aaPredicted RBP3.21□□□□□ -1.9
TFA1YKL028W TRM3Q07527 1436 aa3.21□□□□□ -1.9
TFA1YKL028W HSP26P15992 214 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
TFA1YKL028W HSP12P22943 109 aaKnown RBP3.2□□□□□ -1.9
TFA1YKL028W YBL010CP32788 280 aa3.2□□□□□ -1.9
TFA1YKL028W YKR032WP36127 104 aa3.2□□□□□ -1.9
TFA1YKL028W YEL028WP39989 153 aa3.2□□□□□ -1.9
TFA1YKL028W BUD25P85052 153 aa3.2□□□□□ -1.9
TFA1YKL028W YMR295CQ03559 197 aa3.2□□□□□ -1.9
TFA1YKL028W YDR102CQ03864 110 aa3.2□□□□□ -1.9
TFA1YKL028W SHH3Q04487 196 aa3.2□□□□□ -1.9
TFA1YKL028W FSF1Q12029 327 aaKnown RBP3.2□□□□□ -1.9
TFA1YKL028W PCL1P24867 279 aa3.19□□□□□ -1.9
TFA1YKL028W YKR070WP36151 352 aaKnown RBP3.19□□□□□ -1.9
TFA1YKL028W CUP9P41817 306 aa3.19□□□□□ -1.9
TFA1YKL028W YFL012WP43580 148 aa3.19□□□□□ -1.9
TFA1YKL028W MPC3P53311 146 aa3.19□□□□□ -1.9
TFA1YKL028W TMA23Q03525 211 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms