RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C YPS6P40583 537 aa1.78□□□□□ -2.12
UFD4YKL010C BRR6P53062 197 aa1.78□□□□□ -2.12
UFD4YKL010C ARL3Q02804 198 aa1.78□□□□□ -2.12
UFD4YKL010C YAP6Q03935 383 aa1.78□□□□□ -2.12
UFD4YKL010C LRS4Q04087 347 aaKnown RBP1.78□□□□□ -2.12
UFD4YKL010C PRP46Q12417 451 aaPredicted RBP1.78□□□□□ -2.12
UFD4YKL010C YDL085C-AQ3E7B7 68 aaKnown RBP1.78□□□□□ -2.12
UFD4YKL010C MRPL44P19956 98 aa1.78□□□□□ -2.12
UFD4YKL010C RPI1P23250 407 aaKnown RBP1.78□□□□□ -2.12
UFD4YKL010C SEC24P40482 926 aaKnown RBP1.78□□□□□ -2.12
UFD4YKL010C REE1P40893 198 aa1.78□□□□□ -2.12
UFD4YKL010C YDR102CQ03864 110 aa1.78□□□□□ -2.12
UFD4YKL010C YOL118CQ08259 102 aa1.78□□□□□ -2.12
UFD4YKL010C TMA17Q12513 150 aa1.78□□□□□ -2.12
UFD4YKL010C YCR007CP25354 239 aa1.78□□□□□ -2.12
UFD4YKL010C COQ3P27680 312 aa1.78□□□□□ -2.12
UFD4YKL010C IMP1P28627 190 aa1.78□□□□□ -2.12
UFD4YKL010C BDH1P39714 382 aa1.78□□□□□ -2.12
UFD4YKL010C TTI2P47168 421 aa1.78□□□□□ -2.12
UFD4YKL010C YGR018CP53211 109 aa1.78□□□□□ -2.12
UFD4YKL010C AGC1Q12482 902 aa1.78□□□□□ -2.12
UFD4YKL010C REC104P33323 182 aa1.78□□□□□ -2.13
UFD4YKL010C GON7P46984 123 aa1.78□□□□□ -2.13
UFD4YKL010C SLX9P53251 210 aaPredicted RBP1.78□□□□□ -2.13
UFD4YKL010C MIX17Q03667 156 aa1.78□□□□□ -2.13
UFD4YKL010C YMR090WQ04304 227 aaKnown RBP1.78□□□□□ -2.13
UFD4YKL010C DAL4Q04895 635 aa1.78□□□□□ -2.13
UFD4YKL010C DYN1P36022 4092 aa1.77□□□□□ -2.13
UFD4YKL010C PAU16P35994 123 aa1.77□□□□□ -2.13
UFD4YKL010C MIX23P38162 196 aa1.77□□□□□ -2.13
UFD4YKL010C CDS1P38221 457 aa1.77□□□□□ -2.13
UFD4YKL010C PIC2P40035 300 aa1.77□□□□□ -2.13
UFD4YKL010C OST3P48439 350 aa1.77□□□□□ -2.13
UFD4YKL010C ARC18Q05933 178 aaKnown RBP1.77□□□□□ -2.13
UFD4YKL010C DCN1Q12395 269 aa1.77□□□□□ -2.13
UFD4YKL010C YCR022CP25620 114 aa1.77□□□□□ -2.13
UFD4YKL010C UPS2P35200 230 aa1.77□□□□□ -2.13
UFD4YKL010C MRPL28P36527 147 aa1.77□□□□□ -2.13
UFD4YKL010C LTP1P40347 161 aa1.77□□□□□ -2.13
UFD4YKL010C DFG10P40526 253 aa1.77□□□□□ -2.13
UFD4YKL010C IMP2P46972 177 aa1.77□□□□□ -2.13
UFD4YKL010C HST4P53688 370 aa1.77□□□□□ -2.13
UFD4YKL010C FYV6P53913 173 aa1.77□□□□□ -2.13
UFD4YKL010C YPL067CQ02754 198 aa1.77□□□□□ -2.13
UFD4YKL010C IZH1Q03419 316 aa1.77□□□□□ -2.13
UFD4YKL010C UTP23Q12339 254 aaKnown RBP1.77□□□□□ -2.13
UFD4YKL010C HEM4P06174 275 aa1.77□□□□□ -2.13
UFD4YKL010C MRS1P07266 363 aa1.77□□□□□ -2.13
UFD4YKL010C SOR1P35497 357 aaKnown RBP1.77□□□□□ -2.13
UFD4YKL010C MCH2P36032 473 aa1.77□□□□□ -2.13
UFD4YKL010C PRS4P38063 326 aaPredicted RBP1.77□□□□□ -2.13
UFD4YKL010C ATF1P40353 525 aa1.77□□□□□ -2.13
UFD4YKL010C YJL163CP46996 555 aa1.77□□□□□ -2.13
UFD4YKL010C YAP1802P53309 568 aa1.77□□□□□ -2.13
UFD4YKL010C YNR064CP53750 290 aa1.77□□□□□ -2.13
UFD4YKL010C DPB4Q04603 196 aaKnown RBP1.77□□□□□ -2.13
UFD4YKL010C ARR2Q06597 130 aa1.77□□□□□ -2.13
UFD4YKL010C SOR2Q07786 357 aa1.77□□□□□ -2.13
UFD4YKL010C PAU23Q07987 124 aa1.77□□□□□ -2.13
UFD4YKL010C RKI1Q12189 258 aa1.77□□□□□ -2.13
UFD4YKL010C PAU17Q12370 124 aa1.77□□□□□ -2.13
UFD4YKL010C ERG27Q12452 347 aaKnown RBP1.77□□□□□ -2.13
UFD4YKL010C SOD1P00445 154 aaKnown RBP1.76□□□□□ -2.13
UFD4YKL010C YER190C-BP0CX94 160 aa1.76□□□□□ -2.13
UFD4YKL010C YEL077W-AP0CX95 160 aa1.76□□□□□ -2.13
UFD4YKL010C YGR296C-BP0CX96 160 aa1.76□□□□□ -2.13
UFD4YKL010C YPL283W-BP0CX97 160 aa1.76□□□□□ -2.13
UFD4YKL010C YPR204C-AP0CX98 160 aa1.76□□□□□ -2.13
UFD4YKL010C CPT1P17898 393 aa1.76□□□□□ -2.13
UFD4YKL010C CPR2P23285 205 aa1.76□□□□□ -2.13
UFD4YKL010C YBR184WP38299 523 aa1.76□□□□□ -2.13
UFD4YKL010C YHR173CP38864 112 aa1.76□□□□□ -2.13
UFD4YKL010C GLE2P40066 365 aa1.76□□□□□ -2.13
UFD4YKL010C CDC40P40968 455 aaPredicted RBP1.76□□□□□ -2.13
UFD4YKL010C FCF2Q12035 217 aaPredicted RBP1.76□□□□□ -2.13
UFD4YKL010C YOR192C-CQ3E736 78 aa1.76□□□□□ -2.13
UFD4YKL010C ADE8P04161 214 aa1.76□□□□□ -2.13
UFD4YKL010C DDI2P0CH63 225 aa1.76□□□□□ -2.13
UFD4YKL010C DDI3P0CH64 225 aa1.76□□□□□ -2.13
UFD4YKL010C SPO13P23624 291 aa1.76□□□□□ -2.13
UFD4YKL010C SIP18P50263 79 aa1.76□□□□□ -2.13
UFD4YKL010C APS2Q00381 147 aa1.76□□□□□ -2.13
UFD4YKL010C MRX11Q03079 207 aa1.76□□□□□ -2.13
UFD4YKL010C YPL278CQ08990 100 aa1.76□□□□□ -2.13
UFD4YKL010C USV1Q12132 391 aa1.76□□□□□ -2.13
UFD4YKL010C YOR015WQ12169 119 aa1.76□□□□□ -2.13
UFD4YKL010C NCE102Q12207 173 aaRIP-Chip data1.76□□□□□ -2.13not detected
UFD4YKL010C Q0144Q9ZZW2 109 aa1.76□□□□□ -2.13
UFD4YKL010C STE4P18851 423 aa1.76□□□□□ -2.13
UFD4YKL010C AME1P38313 324 aa1.76□□□□□ -2.13
UFD4YKL010C YHR138CP38841 114 aaPredicted RBP1.76□□□□□ -2.13
UFD4YKL010C PMT3P47190 753 aa1.76□□□□□ -2.13
UFD4YKL010C YGR219WP53307 113 aa1.76□□□□□ -2.13
UFD4YKL010C YMR166CQ03829 368 aa1.76□□□□□ -2.13
UFD4YKL010C MHR1Q06630 226 aa1.76□□□□□ -2.13
UFD4YKL010C FMP49A0A023PZB3 126 aa1.76□□□□□ -2.13
UFD4YKL010C POR1P04840 283 aaKnown RBP1.76□□□□□ -2.13
UFD4YKL010C PIS1P06197 220 aaKnown RBP1.76□□□□□ -2.13
UFD4YKL010C TRP4P07285 380 aaPredicted RBP1.76□□□□□ -2.13
UFD4YKL010C RPS16AP0CX51 143 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 169.8 ms