RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C YCR025CP25352 136 aa2.72□□□□□ -1.97
RPN1YHR027C YHL026CP38740 315 aa2.72□□□□□ -1.97
RPN1YHR027C GZF3P42944 551 aaKnown RBP2.72□□□□□ -1.97
RPN1YHR027C YPR098CQ06089 161 aa2.72□□□□□ -1.97
RPN1YHR027C ENV9Q08651 330 aa2.72□□□□□ -1.97
RPN1YHR027C UBC5P15732 148 aa2.71□□□□□ -1.98
RPN1YHR027C NPR1P22211 790 aa2.71□□□□□ -1.98
RPN1YHR027C MKK1P32490 508 aa2.71□□□□□ -1.98
RPN1YHR027C RPS20P38701 121 aaKnown RBP2.71□□□□□ -1.98
RPN1YHR027C SCD6P45978 349 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
RPN1YHR027C OST2P46964 130 aa2.71□□□□□ -1.98
RPN1YHR027C YJL118WP47022 219 aa2.71□□□□□ -1.98
RPN1YHR027C YDL186WP48568 277 aa2.71□□□□□ -1.98
RPN1YHR027C YNR048WP53740 393 aa2.71□□□□□ -1.98
RPN1YHR027C MZM1Q03429 123 aaPredicted RBP2.71□□□□□ -1.98
RPN1YHR027C YDL242WQ07746 117 aa2.71□□□□□ -1.98
RPN1YHR027C PEX11Q12462 236 aa2.71□□□□□ -1.98
RPN1YHR027C ODC2Q99297 307 aa2.71□□□□□ -1.98
RPN1YHR027C ATG40Q99325 256 aa2.71□□□□□ -1.98
RPN1YHR027C CYT1P07143 309 aa2.71□□□□□ -1.98
RPN1YHR027C YOL162WP0CF19 215 aa2.71□□□□□ -1.98
RPN1YHR027C CPR2P23285 205 aa2.71□□□□□ -1.98
RPN1YHR027C AHT1P29589 182 aa2.71□□□□□ -1.98
RPN1YHR027C SGE1P33335 543 aa2.71□□□□□ -1.98
RPN1YHR027C IXR1P33417 597 aa2.71□□□□□ -1.98
RPN1YHR027C ATX1P38636 73 aa2.71□□□□□ -1.98
RPN1YHR027C YEL068CP39977 110 aa2.71□□□□□ -1.98
RPN1YHR027C SDP1P40479 209 aa2.71□□□□□ -1.98
RPN1YHR027C YIP5P53108 310 aa2.71□□□□□ -1.98
RPN1YHR027C ALG13P53178 202 aa2.71□□□□□ -1.98
RPN1YHR027C TRM112P53738 135 aaPredicted RBP2.71□□□□□ -1.98
RPN1YHR027C ALG9P53868 555 aaKnown RBP2.71□□□□□ -1.98
RPN1YHR027C YLR296WQ05898 108 aa2.71□□□□□ -1.98
RPN1YHR027C OPI10Q08202 246 aa2.71□□□□□ -1.98
RPN1YHR027C YGL010WP25338 174 aa2.7□□□□□ -1.98
RPN1YHR027C ADK2P26364 225 aa2.7□□□□□ -1.98
RPN1YHR027C RPB7P34087 171 aa2.7□□□□□ -1.98
RPN1YHR027C MAC1P35192 417 aa2.7□□□□□ -1.98
RPN1YHR027C ARC18Q05933 178 aaKnown RBP2.7□□□□□ -1.98
RPN1YHR027C ATG33Q06485 197 aa2.7□□□□□ -1.98
RPN1YHR027C NAT3Q06504 195 aa2.7□□□□□ -1.98
RPN1YHR027C SME1Q12330 94 aaPredicted RBP2.7□□□□□ -1.98
RPN1YHR027C SCS22Q6Q595 175 aa2.7□□□□□ -1.98
RPN1YHR027C FMP49A0A023PZB3 126 aa2.7□□□□□ -1.98
RPN1YHR027C RPL7AP05737 244 aaKnown RBP2.7□□□□□ -1.98
RPN1YHR027C YAR066WP0CX18 203 aa2.7□□□□□ -1.98
RPN1YHR027C YHR214WP0CX19 203 aa2.7□□□□□ -1.98
RPN1YHR027C CTA1P15202 515 aa2.7□□□□□ -1.98
RPN1YHR027C FCY2P17064 533 aa2.7□□□□□ -1.98
RPN1YHR027C MRPL20P22354 195 aaPredicted RBP2.7□□□□□ -1.98
RPN1YHR027C YCR100CP25606 316 aa2.7□□□□□ -1.98
RPN1YHR027C MF(ALPHA)2P32435 120 aa2.7□□□□□ -1.98
RPN1YHR027C AGA2P32781 87 aa2.7□□□□□ -1.98
RPN1YHR027C YKL070WP36087 169 aa2.7□□□□□ -1.98
RPN1YHR027C PRY1P47032 299 aa2.7□□□□□ -1.98
RPN1YHR027C BAT2P47176 376 aaKnown RBP2.7□□□□□ -1.98
RPN1YHR027C MIC27P50945 234 aa2.7□□□□□ -1.98
RPN1YHR027C UBC11P52492 156 aa2.7□□□□□ -1.98
RPN1YHR027C RIM9Q04734 239 aa2.7□□□□□ -1.98
RPN1YHR027C LIP2Q06005 328 aa2.7□□□□□ -1.98
RPN1YHR027C YPL264CQ08980 353 aa2.7□□□□□ -1.98
RPN1YHR027C PRP46Q12417 451 aaPredicted RBP2.7□□□□□ -1.98
RPN1YHR027C INO2P26798 304 aa2.7□□□□□ -1.98
RPN1YHR027C FUN19P28003 413 aaPredicted RBP2.7□□□□□ -1.98
RPN1YHR027C HXT4P32467 576 aa2.7□□□□□ -1.98
RPN1YHR027C TIR2P33890 251 aa2.7□□□□□ -1.98
RPN1YHR027C SWD2P36104 329 aaPredicted RBP2.7□□□□□ -1.98
RPN1YHR027C YAR068WP39564 161 aa2.7□□□□□ -1.98
RPN1YHR027C YJR124CP47159 448 aa2.7□□□□□ -1.98
RPN1YHR027C SUN4P53616 420 aa2.7□□□□□ -1.98
RPN1YHR027C YML079WQ03629 201 aa2.7□□□□□ -1.98
RPN1YHR027C FCF1Q05498 189 aaPredicted RBP2.7□□□□□ -1.98
RPN1YHR027C GRX8Q05926 109 aa2.7□□□□□ -1.98
RPN1YHR027C YOR376WQ08900 122 aa2.7□□□□□ -1.98
RPN1YHR027C DAP1Q12091 152 aa2.7□□□□□ -1.98
RPN1YHR027C COA2Q3E823 68 aa2.7□□□□□ -1.98
RPN1YHR027C MSB2P32334 1306 aa2.69□□□□□ -1.98
RPN1YHR027C YDR157WA0A023PZE8 133 aa2.69□□□□□ -1.98
RPN1YHR027C CPT1P17898 393 aa2.69□□□□□ -1.98
RPN1YHR027C SRP21P32342 167 aa2.69□□□□□ -1.98
RPN1YHR027C TIM23P32897 222 aa2.69□□□□□ -1.98
RPN1YHR027C BTT1P40314 149 aaPredicted RBP2.69□□□□□ -1.98
RPN1YHR027C XBP1P40489 647 aa2.69□□□□□ -1.98
RPN1YHR027C RPL34BP40525 121 aaKnown RBP2.69□□□□□ -1.98
RPN1YHR027C YJL007CP47080 104 aa2.69□□□□□ -1.98
RPN1YHR027C CSL4P53859 292 aaPredicted RBP2.69□□□□□ -1.98
RPN1YHR027C YPQ1Q12010 308 aa2.69□□□□□ -1.98
RPN1YHR027C YDR215CQ12240 137 aa2.69□□□□□ -1.98
RPN1YHR027C YKL023C-AQ2V2P3 75 aa2.69□□□□□ -1.98
RPN1YHR027C YDL007C-AQ2V2Q0 85 aa2.69□□□□□ -1.98
RPN1YHR027C RPS22BQ3E7Y3 130 aaKnown RBP2.69□□□□□ -1.98
RPN1YHR027C STE18P18852 110 aa2.69□□□□□ -1.98
RPN1YHR027C VID24P38263 362 aa2.69□□□□□ -1.98
RPN1YHR027C YGP1P38616 354 aaKnown RBP2.69□□□□□ -1.98
RPN1YHR027C GPI2P46961 280 aa2.69□□□□□ -1.98
RPN1YHR027C TOS2P50078 622 aa2.69□□□□□ -1.98
RPN1YHR027C SCW4P53334 386 aaKnown RBP2.69□□□□□ -1.98
RPN1YHR027C SWT21P53873 357 aaPredicted RBP2.69□□□□□ -1.98
RPN1YHR027C OPI3P05375 206 aa2.68□□□□□ -1.98
RPN1YHR027C RPS13P05756 151 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms