RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	YGL235W	P53071	178 aa		1.21	□□□□□ -2.22
DOT6	YER088C	YGL034C	P53186	121 aa		1.21	□□□□□ -2.22
DOT6	YER088C	FMN1	Q03778	218 aa		1.21	□□□□□ -2.22
DOT6	YER088C	YMR226C	Q05016	267 aa	Known RBP	1.21	□□□□□ -2.22
DOT6	YER088C	YOL131W	Q08270	108 aa		1.21	□□□□□ -2.22
DOT6	YER088C	SGA1	P08019	549 aa		1.2	□□□□□ -2.22
DOT6	YER088C	ERD2	P18414	219 aa		1.2	□□□□□ -2.22
DOT6	YER088C	HSP30	P25619	332 aa		1.2	□□□□□ -2.22
DOT6	YER088C	MIC12	P38341	106 aa		1.2	□□□□□ -2.22
DOT6	YER088C	YJL016W	P47072	561 aa		1.2	□□□□□ -2.22
DOT6	YER088C	NIF3	P53081	288 aa		1.2	□□□□□ -2.22
DOT6	YER088C	COS6	P53344	381 aa		1.2	□□□□□ -2.22
DOT6	YER088C	MRPS17	Q03246	237 aa	Predicted RBP	1.2	□□□□□ -2.22
DOT6	YER088C	YPR127W	Q06494	345 aa		1.2	□□□□□ -2.22
DOT6	YER088C	YLR053C	Q12026	108 aa		1.2	□□□□□ -2.22
DOT6	YER088C	YKL018C-A	Q3E7A7	99 aa		1.2	□□□□□ -2.22
DOT6	YER088C	YBR121C-A	P0C5L4	52 aa		1.2	□□□□□ -2.22
DOT6	YER088C	YMR31	P19955	123 aa		1.2	□□□□□ -2.22
DOT6	YER088C	TIM12	P32830	109 aa		1.2	□□□□□ -2.22
DOT6	YER088C	PTC1	P35182	281 aa		1.2	□□□□□ -2.22
DOT6	YER088C	RIB1	P38066	345 aa		1.2	□□□□□ -2.22
DOT6	YER088C	FCY21	P40039	528 aa		1.2	□□□□□ -2.22
DOT6	YER088C	MRPL49	P40858	161 aa	Predicted RBP	1.2	□□□□□ -2.22
DOT6	YER088C	DAN1	P47178	298 aa		1.2	□□□□□ -2.22
DOT6	YER088C	YNL010W	P53981	241 aa	Known RBP	1.2	□□□□□ -2.22
DOT6	YER088C	SPG4	Q04438	115 aa		1.2	□□□□□ -2.22
DOT6	YER088C	ARR2	Q06597	130 aa		1.2	□□□□□ -2.22
DOT6	YER088C	USB1	Q12208	290 aa	Known RBP	1.2	□□□□□ -2.22
DOT6	YER088C	SAS5	Q99314	248 aa		1.2	□□□□□ -2.22
DOT6	YER088C	RPL28	P02406	149 aa	Known RBP	1.19	□□□□□ -2.22
DOT6	YER088C	MER1	P16523	270 aa		1.19	□□□□□ -2.22
DOT6	YER088C	AUA1	P32450	94 aa		1.19	□□□□□ -2.22
DOT6	YER088C	CBT1	P36038	271 aa	Predicted RBP	1.19	□□□□□ -2.22
DOT6	YER088C	CTR2	P38865	189 aa		1.19	□□□□□ -2.22
DOT6	YER088C	SMX2	P40204	77 aa	Known RBP	1.19	□□□□□ -2.22
DOT6	YER088C	MPC1	P53157	130 aa	Known RBP	1.19	□□□□□ -2.22
DOT6	YER088C	YDC1	Q02896	317 aa		1.19	□□□□□ -2.22
DOT6	YER088C	HEM25	Q07534	307 aa		1.19	□□□□□ -2.22
DOT6	YER088C	YOR283W	Q12040	230 aa	Known RBP	1.19	□□□□□ -2.22
DOT6	YER088C	CDC8	P00572	216 aa		1.18	□□□□□ -2.22
DOT6	YER088C	RPL39	P04650	51 aa		1.18	□□□□□ -2.22
DOT6	YER088C	YPK2	P18961	677 aa		1.18	□□□□□ -2.22
DOT6	YER088C	CDC10	P25342	322 aa	Known RBP	1.18	□□□□□ -2.22
DOT6	YER088C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	1.18	□□□□□ -2.22	not detected
DOT6	YER088C	SSH1	P38353	490 aa	Known RBP	1.18	□□□□□ -2.22
DOT6	YER088C	ERG28	P40030	148 aa		1.18	□□□□□ -2.22
DOT6	YER088C	YGR201C	P42936	225 aa		1.18	□□□□□ -2.22
DOT6	YER088C	SMD3	P43321	101 aa	Known RBP	1.18	□□□□□ -2.22
DOT6	YER088C	DSK2	P48510	373 aa		1.18	□□□□□ -2.22
DOT6	YER088C	MIC26	P50087	233 aa		1.18	□□□□□ -2.22
DOT6	YER088C	NSA1	P53136	463 aa	Predicted RBP	1.18	□□□□□ -2.22
DOT6	YER088C	CUS2	P53830	285 aa	Predicted RBP	1.18	□□□□□ -2.22
DOT6	YER088C	PEX12	Q04370	399 aa		1.18	□□□□□ -2.22
DOT6	YER088C	YLR126C	Q12288	251 aa		1.18	□□□□□ -2.22
DOT6	YER088C	RPL27A	P0C2H6	136 aa	Known RBP	1.18	□□□□□ -2.22
DOT6	YER088C	RPL27B	P0C2H7	136 aa	Known RBP	1.18	□□□□□ -2.22
DOT6	YER088C	MRPS28	P21771	286 aa		1.18	□□□□□ -2.22
DOT6	YER088C	RNP1	P32385	249 aa		1.18	□□□□□ -2.22
DOT6	YER088C	LHP1	P33399	275 aa	Known RBP	1.18	□□□□□ -2.22
DOT6	YER088C	ECM31	P38122	312 aa		1.18	□□□□□ -2.22
DOT6	YER088C	GOS1	P38736	223 aa		1.18	□□□□□ -2.22
DOT6	YER088C	RTC3	P38804	111 aa	Predicted RBP	1.18	□□□□□ -2.22
DOT6	YER088C	YNL194C	P40169	301 aa		1.18	□□□□□ -2.22
DOT6	YER088C	FIP1	P45976	327 aa		1.18	□□□□□ -2.22
DOT6	YER088C	RPA43	P46669	326 aa		1.18	□□□□□ -2.22
DOT6	YER088C	XPT1	P47165	209 aa		1.18	□□□□□ -2.22
DOT6	YER088C	NUP57	P48837	541 aa		1.18	□□□□□ -2.22
DOT6	YER088C	MRH4	P53166	561 aa		1.18	□□□□□ -2.22
DOT6	YER088C	FYV6	P53913	173 aa		1.18	□□□□□ -2.22
DOT6	YER088C	CTF19	Q02732	369 aa		1.18	□□□□□ -2.22
DOT6	YER088C	YDR102C	Q03864	110 aa		1.18	□□□□□ -2.22
DOT6	YER088C	SYC1	Q08553	188 aa	Predicted RBP	1.18	□□□□□ -2.22
DOT6	YER088C	DCN1	Q12395	269 aa		1.18	□□□□□ -2.22
DOT6	YER088C	YKL183C-A	Q3E765	70 aa		1.18	□□□□□ -2.22
DOT6	YER088C	YBL008W-A	Q3E821	79 aa		1.18	□□□□□ -2.22
DOT6	YER088C	HTB1	P02293	131 aa	Known RBP	1.17	□□□□□ -2.22
DOT6	YER088C	HTB2	P02294	131 aa		1.17	□□□□□ -2.22
DOT6	YER088C	DSF1	P0CX08	502 aa		1.17	□□□□□ -2.22
DOT6	YER088C	YNR073C	P0CX09	502 aa		1.17	□□□□□ -2.22
DOT6	YER088C	YKL075C	P36083	450 aa		1.17	□□□□□ -2.22
DOT6	YER088C	MRPL17	P36528	281 aa		1.17	□□□□□ -2.22
DOT6	YER088C	RGI1	P40043	161 aa	Predicted RBP	1.17	□□□□□ -2.22
DOT6	YER088C	FLX1	P40464	311 aa		1.17	□□□□□ -2.22
DOT6	YER088C	YRB2	P40517	327 aa		1.17	□□□□□ -2.22
DOT6	YER088C	ILM1	P47155	203 aa		1.17	□□□□□ -2.22
DOT6	YER088C	MCM22	P47167	239 aa		1.17	□□□□□ -2.22
DOT6	YER088C	CWC23	P52868	283 aa	Predicted RBP	1.17	□□□□□ -2.22
DOT6	YER088C	HHT1	P61830	136 aa		1.17	□□□□□ -2.22
DOT6	YER088C	MSW1	P04803	379 aa		1.16	□□□□□ -2.22
DOT6	YER088C	SCM4	P32564	187 aa		1.16	□□□□□ -2.22
DOT6	YER088C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	1.16	□□□□□ -2.22	not detected
DOT6	YER088C	YBR032W	P38223	100 aa		1.16	□□□□□ -2.22
DOT6	YER088C	HAM1	P47119	197 aa	Known RBP	1.16	□□□□□ -2.22
DOT6	YER088C	GET1	P53192	235 aa		1.16	□□□□□ -2.22
DOT6	YER088C	YNR062C	P53748	327 aa		1.16	□□□□□ -2.22
DOT6	YER088C	DIG2	Q03373	323 aa	Known RBP	1.16	□□□□□ -2.22
DOT6	YER088C	YML108W	Q03759	105 aa		1.16	□□□□□ -2.22
DOT6	YER088C	RNH202	Q05635	350 aa		1.16	□□□□□ -2.22
DOT6	YER088C	EMC6	Q12431	108 aa		1.16	□□□□□ -2.22
DOT6	YER088C	MHF2	Q3E829	80 aa		1.16	□□□□□ -2.22

Retrieved 100 of 5,963 RNA–protein pairs in 114.9 ms