RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C SSS1P35179 80 aa2.97□□□□□ -1.93
TRS120YDR407C YKR045CP36138 183 aa2.97□□□□□ -1.93
TRS120YDR407C BDH1P39714 382 aa2.97□□□□□ -1.93
TRS120YDR407C PIC2P40035 300 aa2.97□□□□□ -1.93
TRS120YDR407C XPT1P47165 209 aa2.97□□□□□ -1.93
TRS120YDR407C RPL7BQ12213 244 aaKnown RBP2.97□□□□□ -1.93
TRS120YDR407C PRP46Q12417 451 aaPredicted RBP2.97□□□□□ -1.93
TRS120YDR407C BRR2P32639 2163 aaKnown RBP2.97□□□□□ -1.93
TRS120YDR407C IRA2P19158 3079 aa2.97□□□□□ -1.93
TRS120YDR407C RPI1P23250 407 aaKnown RBP2.96□□□□□ -1.93
TRS120YDR407C UPS2P35200 230 aa2.96□□□□□ -1.93
TRS120YDR407C PIG2P40187 538 aa2.96□□□□□ -1.93
TRS120YDR407C ALG12P53730 551 aa2.96□□□□□ -1.93
TRS120YDR407C SEN15Q04675 128 aa2.96□□□□□ -1.93
TRS120YDR407C FCY22Q12119 530 aa2.96□□□□□ -1.93
TRS120YDR407C UTR5P32630 166 aa2.96□□□□□ -1.94
TRS120YDR407C NSA2P40078 261 aaKnown RBP2.96□□□□□ -1.94
TRS120YDR407C ECO1P43605 281 aa2.96□□□□□ -1.94
TRS120YDR407C HSV2P50079 448 aaPredicted RBP2.96□□□□□ -1.94
TRS120YDR407C SLX9P53251 210 aaPredicted RBP2.96□□□□□ -1.94
TRS120YDR407C DUG3P53871 357 aa2.96□□□□□ -1.94
TRS120YDR407C DIG2Q03373 323 aaKnown RBP2.96□□□□□ -1.94
TRS120YDR407C MIX17Q03667 156 aa2.96□□□□□ -1.94
TRS120YDR407C YAP6Q03935 383 aa2.96□□□□□ -1.94
TRS120YDR407C YIL077CP40508 320 aa2.96□□□□□ -1.94
TRS120YDR407C YFL051CP43552 160 aa2.96□□□□□ -1.94
TRS120YDR407C YJL027CP47063 138 aaPredicted RBP2.96□□□□□ -1.94
TRS120YDR407C PMT3P47190 753 aa2.96□□□□□ -1.94
TRS120YDR407C YMR007WQ03675 126 aa2.96□□□□□ -1.94
TRS120YDR407C TVP18Q04767 167 aa2.96□□□□□ -1.94
TRS120YDR407C YER190C-BP0CX94 160 aa2.95□□□□□ -1.94
TRS120YDR407C YEL077W-AP0CX95 160 aa2.95□□□□□ -1.94
TRS120YDR407C YGR296C-BP0CX96 160 aa2.95□□□□□ -1.94
TRS120YDR407C YPL283W-BP0CX97 160 aa2.95□□□□□ -1.94
TRS120YDR407C YPR204C-AP0CX98 160 aa2.95□□□□□ -1.94
TRS120YDR407C YFL015CP43578 164 aa2.95□□□□□ -1.94
TRS120YDR407C PAM18Q07914 168 aa2.95□□□□□ -1.94
TRS120YDR407C ADE8P04161 214 aa2.95□□□□□ -1.94
TRS120YDR407C POC4Q12245 148 aaPredicted RBP2.95□□□□□ -1.94
TRS120YDR407C AGC1Q12482 902 aa2.95□□□□□ -1.94
TRS120YDR407C LDB16P25587 256 aa2.95□□□□□ -1.94
TRS120YDR407C TEM1P38987 245 aa2.95□□□□□ -1.94
TRS120YDR407C YAP1802P53309 568 aa2.95□□□□□ -1.94
TRS120YDR407C THI72Q08579 599 aa2.95□□□□□ -1.94
TRS120YDR407C YCR007CP25354 239 aa2.94□□□□□ -1.94
TRS120YDR407C SUA7P29055 345 aaPredicted RBP2.94□□□□□ -1.94
TRS120YDR407C RPS0AP32905 252 aaKnown RBP2.94□□□□□ -1.94
TRS120YDR407C YER188WP40103 239 aa2.94□□□□□ -1.94
TRS120YDR407C HST4P53688 370 aa2.94□□□□□ -1.94
TRS120YDR407C YMR090WQ04304 227 aaKnown RBP2.94□□□□□ -1.94
TRS120YDR407C YIL134C-AQ45U18 67 aa2.94□□□□□ -1.94
TRS120YDR407C FMP49A0A023PZB3 126 aa2.94□□□□□ -1.94
TRS120YDR407C ATP10P18496 279 aa2.94□□□□□ -1.94
TRS120YDR407C YIL012WP40551 113 aa2.94□□□□□ -1.94
TRS120YDR407C FIT2Q08906 153 aa2.94□□□□□ -1.94
TRS120YDR407C DAL82P21705 255 aa2.94□□□□□ -1.94
TRS120YDR407C YHR173CP38864 112 aa2.94□□□□□ -1.94
TRS120YDR407C REE1P40893 198 aa2.94□□□□□ -1.94
TRS120YDR407C ERV25P54837 211 aaKnown RBP2.94□□□□□ -1.94
TRS120YDR407C SKO1Q02100 647 aa2.94□□□□□ -1.94
TRS120YDR407C MGR2Q02889 113 aa2.94□□□□□ -1.94
TRS120YDR407C ECM18Q04623 453 aa2.94□□□□□ -1.94
TRS120YDR407C SNA4Q07549 140 aa2.94□□□□□ -1.94
TRS120YDR407C YOR029WQ12243 111 aa2.94□□□□□ -1.94
TRS120YDR407C MRS1P07266 363 aa2.93□□□□□ -1.94
TRS120YDR407C DFR1P07807 211 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
TRS120YDR407C YHR213WP0CI67 198 aa2.93□□□□□ -1.94
TRS120YDR407C YNK1P36010 153 aaKnown RBP2.93□□□□□ -1.94
TRS120YDR407C PRS4P38063 326 aaPredicted RBP2.93□□□□□ -1.94
TRS120YDR407C YNL046WP53956 172 aa2.93□□□□□ -1.94
TRS120YDR407C ERP4Q12450 207 aa2.93□□□□□ -1.94
TRS120YDR407C RPL9AP05738 191 aaKnown RBP2.93□□□□□ -1.94
TRS120YDR407C YFL068WP0CX99 160 aa2.93□□□□□ -1.94
TRS120YDR407C YLL066W-AP0CY00 160 aa2.93□□□□□ -1.94
TRS120YDR407C YLL067W-AP0CY01 160 aa2.93□□□□□ -1.94
TRS120YDR407C SEC62P21825 274 aa2.93□□□□□ -1.94
TRS120YDR407C GSP1P32835 219 aaKnown RBP2.93□□□□□ -1.94
TRS120YDR407C GSP2P32836 220 aaKnown RBP2.93□□□□□ -1.94
TRS120YDR407C DSK2P48510 373 aa2.93□□□□□ -1.94
TRS120YDR407C RPL9BP51401 191 aaKnown RBP2.93□□□□□ -1.94
TRS120YDR407C GEP7P53171 287 aa2.93□□□□□ -1.94
TRS120YDR407C IRA1P18963 3092 aa2.93□□□□□ -1.94
TRS120YDR407C PIS1P06197 220 aaKnown RBP2.93□□□□□ -1.94
TRS120YDR407C SEC11P15367 167 aa2.93□□□□□ -1.94
TRS120YDR407C YJL016WP47072 561 aa2.93□□□□□ -1.94
TRS120YDR407C YGL230CP53074 147 aa2.93□□□□□ -1.94
TRS120YDR407C YML122CQ03207 126 aa2.93□□□□□ -1.94
TRS120YDR407C LPP1Q04396 274 aa2.93□□□□□ -1.94
TRS120YDR407C SHH3Q04487 196 aa2.93□□□□□ -1.94
TRS120YDR407C DPB4Q04603 196 aaKnown RBP2.93□□□□□ -1.94
TRS120YDR407C YMR105W-AQ8TGS8 64 aa2.93□□□□□ -1.94
TRS120YDR407C TY1A-HP0C2I4 478 aaKnown RBP2.93□□□□□ -1.94
TRS120YDR407C ELO2P25358 347 aa2.93□□□□□ -1.94
TRS120YDR407C LTP1P40347 161 aa2.93□□□□□ -1.94
TRS120YDR407C RPA43P46669 326 aa2.93□□□□□ -1.94
TRS120YDR407C CGR1P53188 120 aa2.93□□□□□ -1.94
TRS120YDR407C YGR219WP53307 113 aa2.93□□□□□ -1.94
TRS120YDR407C ERF2Q06551 359 aa2.93□□□□□ -1.94
TRS120YDR407C POS5Q06892 414 aa2.93□□□□□ -1.94
TRS120YDR407C YKL023C-AQ2V2P3 75 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms