RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C ECO1P43605 281 aa5.29□□□□□ -1.56
VPS61YDR136C ARP3P47117 449 aaKnown RBP5.29□□□□□ -1.56
VPS61YDR136C RCE1Q03530 315 aa5.29□□□□□ -1.56
VPS61YDR136C YML053CQ04978 212 aa5.29□□□□□ -1.56
VPS61YDR136C YFH1Q07540 174 aa5.29□□□□□ -1.56
VPS61YDR136C RPL7BQ12213 244 aaKnown RBP5.29□□□□□ -1.56
VPS61YDR136C YDL180WQ12301 547 aa5.29□□□□□ -1.56
VPS61YDR136C PAA1Q12447 191 aaKnown RBP5.29□□□□□ -1.56
VPS61YDR136C ACC1Q00955 2233 aaKnown RBP5.29□□□□□ -1.56
VPS61YDR136C FMP49A0A023PZB3 126 aa5.28□□□□□ -1.56
VPS61YDR136C RPS25BP0C0T4 108 aaKnown RBP5.28□□□□□ -1.56
VPS61YDR136C MSI1P13712 422 aa5.28□□□□□ -1.56
VPS61YDR136C YGL010WP25338 174 aa5.28□□□□□ -1.56
VPS61YDR136C MRPL39P36533 70 aa5.28□□□□□ -1.56
VPS61YDR136C PSD1P39006 500 aa5.28□□□□□ -1.56
VPS61YDR136C YEL057CP39983 233 aa5.28□□□□□ -1.56
VPS61YDR136C EGT2P42835 1041 aa5.28□□□□□ -1.56
VPS61YDR136C YIP5P53108 310 aa5.28□□□□□ -1.56
VPS61YDR136C CRH1P53301 507 aa5.28□□□□□ -1.56
VPS61YDR136C ARR2Q06597 130 aa5.28□□□□□ -1.56
VPS61YDR136C RPS25AQ3E792 108 aaPredicted RBP5.28□□□□□ -1.56
VPS61YDR136C POR1P04840 283 aaKnown RBP5.27□□□□□ -1.57
VPS61YDR136C ROX3P25046 220 aa5.27□□□□□ -1.57
VPS61YDR136C SRP21P32342 167 aa5.27□□□□□ -1.57
VPS61YDR136C SPS18P32572 300 aa5.27□□□□□ -1.57
VPS61YDR136C TCA17P32613 152 aa5.27□□□□□ -1.57
VPS61YDR136C MRPS5P33759 307 aa5.27□□□□□ -1.57
VPS61YDR136C CYB5P40312 120 aa5.27□□□□□ -1.57
VPS61YDR136C RPN14P53196 417 aa5.27□□□□□ -1.57
VPS61YDR136C NRM1P53718 249 aa5.27□□□□□ -1.57
VPS61YDR136C BOR1P53838 576 aa5.27□□□□□ -1.57
VPS61YDR136C YAP6Q03935 383 aa5.27□□□□□ -1.57
VPS61YDR136C NAT3Q06504 195 aa5.27□□□□□ -1.57
VPS61YDR136C LOA1Q06508 300 aa5.27□□□□□ -1.57
VPS61YDR136C RRS1Q08746 203 aaKnown RBP5.27□□□□□ -1.57
VPS61YDR136C FIT3Q08907 204 aa5.27□□□□□ -1.57
VPS61YDR136C POC4Q12245 148 aaPredicted RBP5.27□□□□□ -1.57
VPS61YDR136C YPS3Q12303 508 aa5.27□□□□□ -1.57
VPS61YDR136C YDL085C-AQ3E7B7 68 aaKnown RBP5.27□□□□□ -1.57
VPS61YDR136C TRP4P07285 380 aaPredicted RBP5.26□□□□□ -1.57
VPS61YDR136C YMR31P19955 123 aa5.26□□□□□ -1.57
VPS61YDR136C YKL102CP34249 101 aa5.26□□□□□ -1.57
VPS61YDR136C DER1P38307 211 aa5.26□□□□□ -1.57
VPS61YDR136C RPB11P38902 120 aa5.26□□□□□ -1.57
VPS61YDR136C XPT1P47165 209 aa5.26□□□□□ -1.57
VPS61YDR136C TAF4P50105 388 aa5.26□□□□□ -1.57
VPS61YDR136C YPL067CQ02754 198 aa5.26□□□□□ -1.57
VPS61YDR136C ARR3Q06598 404 aa5.26□□□□□ -1.57
VPS61YDR136C SMT3Q12306 101 aaKnown RBP5.26□□□□□ -1.57
VPS61YDR136C HFA1P32874 2273 aa5.25□□□□□ -1.57
VPS61YDR136C VPS63O13549 108 aa5.25□□□□□ -1.57
VPS61YDR136C RNA15P25299 296 aaPredicted RBP5.25□□□□□ -1.57
VPS61YDR136C ATG15P25641 520 aa5.25□□□□□ -1.57
VPS61YDR136C SUA7P29055 345 aaPredicted RBP5.25□□□□□ -1.57
VPS61YDR136C DAD2P36162 133 aa5.25□□□□□ -1.57
VPS61YDR136C YHR138CP38841 114 aaPredicted RBP5.25□□□□□ -1.57
VPS61YDR136C SRP14P38985 146 aa5.25□□□□□ -1.57
VPS61YDR136C GAT2P40209 560 aa5.25□□□□□ -1.57
VPS61YDR136C DFG10P40526 253 aa5.25□□□□□ -1.57
VPS61YDR136C CDC40P40968 455 aaPredicted RBP5.25□□□□□ -1.57
VPS61YDR136C WSC2P53832 503 aa5.25□□□□□ -1.57
VPS61YDR136C HSK3P69852 69 aa5.25□□□□□ -1.57
VPS61YDR136C YOR105WQ08504 108 aa5.25□□□□□ -1.57
VPS61YDR136C POM33Q12164 279 aa5.25□□□□□ -1.57
VPS61YDR136C Q0144Q9ZZW2 109 aa5.25□□□□□ -1.57
VPS61YDR136C RPL31AP0C2H8 113 aaKnown RBP5.24□□□□□ -1.57
VPS61YDR136C RPL31BP0C2H9 113 aaKnown RBP5.24□□□□□ -1.57
VPS61YDR136C HMX1P32339 317 aa5.24□□□□□ -1.57
VPS61YDR136C REC104P33323 182 aa5.24□□□□□ -1.57
VPS61YDR136C CUE1P38428 203 aa5.24□□□□□ -1.57
VPS61YDR136C YER084WP40057 128 aa5.24□□□□□ -1.57
VPS61YDR136C SAE3P89114 91 aa5.24□□□□□ -1.57
VPS61YDR136C DYN2Q02647 92 aa5.24□□□□□ -1.57
VPS61YDR136C STD1Q02794 444 aa5.24□□□□□ -1.57
VPS61YDR136C YDR209CQ03480 137 aa5.24□□□□□ -1.57
VPS61YDR136C RAF1Q06891 181 aa5.24□□□□□ -1.57
VPS61YDR136C MCH1Q07376 486 aa5.24□□□□□ -1.57
VPS61YDR136C LDS2Q08218 356 aa5.24□□□□□ -1.57
VPS61YDR136C POM34Q12445 299 aa5.24□□□□□ -1.57
VPS61YDR136C YGL258W-AQ3E740 77 aa5.24□□□□□ -1.57
VPS61YDR136C STE4P18851 423 aa5.23□□□□□ -1.57
VPS61YDR136C DAL82P21705 255 aa5.23□□□□□ -1.57
VPS61YDR136C YKL187CP34231 750 aa5.23□□□□□ -1.57
VPS61YDR136C MTC6P38849 526 aa5.23□□□□□ -1.57
VPS61YDR136C UIP3P39547 235 aa5.23□□□□□ -1.57
VPS61YDR136C YJR015WP47090 510 aa5.23□□□□□ -1.57
VPS61YDR136C DSK2P48510 373 aa5.23□□□□□ -1.57
VPS61YDR136C MIC27P50945 234 aa5.23□□□□□ -1.57
VPS61YDR136C ATG4P53867 494 aa5.23□□□□□ -1.57
VPS61YDR136C RPL21AQ02753 160 aaKnown RBP5.23□□□□□ -1.57
VPS61YDR136C YPL077CQ02831 240 aa5.23□□□□□ -1.57
VPS61YDR136C IZH1Q03419 316 aa5.23□□□□□ -1.57
VPS61YDR136C NUP53Q03790 475 aa5.23□□□□□ -1.57
VPS61YDR136C LPP1Q04396 274 aa5.23□□□□□ -1.57
VPS61YDR136C SHH3Q04487 196 aa5.23□□□□□ -1.57
VPS61YDR136C ECM18Q04623 453 aa5.23□□□□□ -1.57
VPS61YDR136C RPL21BQ12672 160 aaKnown RBP5.23□□□□□ -1.57
VPS61YDR136C RPS22BQ3E7Y3 130 aaKnown RBP5.23□□□□□ -1.57
VPS61YDR136C YPR014CQ6B0W2 109 aa5.23□□□□□ -1.57
VPS61YDR136C YOX1P34161 385 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms