RNA–Protein interactions for RNA: ENST00000641536.1

CCDC196-209, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,483 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-209ENST00000641536 CSTF1Q05048 431 aaKnown RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 STRN3Q13033 797 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 NR6A1Q15406 480 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ENOX2Q16206 610 aaKnown RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ZC2HC1CQ53FD0 456 aaPredicted RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 PHLDB3Q6NSJ2 640 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 FAM173BQ6P4H8 233 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 VITQ6UXI7 678 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 USP49Q70CQ1 688 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 MTSS1LQ765P7 747 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 PDZD4Q76G19 769 aaPredicted RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 SYT2Q8N9I0 419 aaPredicted RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ZNF461Q8TAF7 563 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 NXPE3Q969Y0 559 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 RMDN1Q96DB5 314 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 CDK5RAP3Q96JB5 506 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ZFYVE19Q96K21 471 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 SUSD3Q96L08 255 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 DDX23Q9BUQ8 820 aaKnown RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 SMG9Q9H0W8 520 aaKnown RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 DNAJC25Q9H1X3 360 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ZNF334Q9HCZ1 680 aaPredicted RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 BLOC1S4Q9NUP1 217 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 NUP205Q92621 2012 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 WDFY3Q8IZQ1 3526 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 FRYQ5TBA9 3013 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 A0A1W2PRU2 124 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 MED19A0JLT2 244 aaPredicted RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ANKRD63C9JTQ0 380 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 HNRNPDLO14979 420 aaKnown RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 SYN3O14994 580 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 CLDN3O15551 220 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 TRAPPC3O43617 180 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 FAM189A1O60320 539 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 TOM1L1O75674 476 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ATF2P15336 505 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 PTPN2P17706 415 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 GDI1P31150 447 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 PRPHP41219 470 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ID4P47928 161 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ACOT2P49753 483 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 LIG4P49917 911 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 MCL1Q07820 350 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 DUSP4Q13115 394 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 MTAPQ13126 283 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 FZD5Q13467 585 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 MRPL58Q14197 206 aaKnown RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 RABEP1Q15276 862 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 CCDC142Q17RM4 750 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 WDR44Q5JSH3 913 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 HYIQ5T013 277 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 JADE1Q6IE81 842 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ZNF280DQ6N043 979 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 PDXDC1Q6P996 788 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 HAUS6Q7Z4H7 955 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 TMC8Q8IU68 726 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 MYCT1Q8N699 235 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ATAD1Q8NBU5 361 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ARMC2Q8NEN0 867 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 OR10T2Q8NGX3 314 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 SHKBP1Q8TBC3 707 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ZSCAN18Q8TBC5 510 aaPredicted RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 ASB16Q96NS5 453 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 FIZ1Q96SL8 496 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 LPIN3Q9BQK8 851 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 SLITRK6Q9H5Y7 841 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 RBM12Q9NTZ6 932 aaKnown RBP7.55□□□□□ -1.2
CCDC196-209ENST00000641536 SLC38A7Q9NVC3 462 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 C2orf42Q9NWW7 574 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 TBC1D7Q9P0N9 293 aa7.55□□□□□ -1.2
CCDC196-209ENST00000641536 TTC26A0AVF1 554 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 LAMTOR5O43504 91 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 ECI2O75521 394 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 FAM13AO94988 1023 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 C1RP00736 705 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 MARCKSP29966 332 aaPredicted RBP7.54□□□□□ -1.2
CCDC196-209ENST00000641536 GPR15P49685 360 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 CYP4F8P98187 520 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 CEBPZQ03701 1054 aaKnown RBP7.54□□□□□ -1.2
CCDC196-209ENST00000641536 YWHAHQ04917 246 aaPredicted RBP7.54□□□□□ -1.2
CCDC196-209ENST00000641536 PPP2R3AQ06190 1150 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 DMWDQ09019 674 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 KCNA1Q09470 495 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 SRSF5Q13243 272 aaKnown RBP7.54□□□□□ -1.2
CCDC196-209ENST00000641536 UVSSAQ2YD98 709 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 RILPL1Q5EBL4 403 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 DSTYKQ6XUX3 929 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 Q6ZS52 159 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 DYMQ7RTS9 669 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 APBB1IPQ7Z5R6 666 aaPredicted RBP7.54□□□□□ -1.2
CCDC196-209ENST00000641536 TCEAL8Q8IYN2 117 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 SUMF1Q8NBK3 374 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 RASSF8Q8NHQ8 419 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 EPSTI1Q96J88 318 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 LRRC3BQ96PB8 259 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 MSTO1Q9BUK6 570 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 FGFBP2Q9BYJ0 223 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 BCO2Q9BYV7 579 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 BRD9Q9H8M2 597 aa7.54□□□□□ -1.2
CCDC196-209ENST00000641536 ASAH2Q9NR71 780 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms