RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 FBXL5Q9UKA1 691 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 SIK3Q9Y2K2 1263 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 FHOD1Q9Y613 1164 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 CDH23Q9H251 3354 aa13.84□□□□□ -0.19
PHGDH-218ENST00000641491 NCOR1O75376 2440 aa13.83□□□□□ -0.19
PHGDH-218ENST00000641491 TMEM265A0A087WTH1 108 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 A0A1W2PQJ5 194 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 LCHNA4D1U4 455 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 I3L4J1 428 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 C2CD2LO14523 706 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 MED7O43513 233 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 TACC1O75410 805 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 CSPG5O95196 566 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 SOD2P04179 222 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 WEE2P0C1S8 567 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 FAM163BP0C2L3 166 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 CPB1P15086 417 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 MYOGP15173 224 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 CD19P15391 556 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 DNAJB2P25686 324 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 ASPAP45381 313 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 RAP1GAPP47736 663 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 GSDMDP57764 484 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 ZBED6P86452 979 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 UBE3AQ05086 875 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 PTK2Q05397 1052 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 KCNMA1Q12791 1236 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 MAPRE1Q15691 268 aaKnown RBP13.83□□□□□ -0.2
PHGDH-218ENST00000641491 PTPN21Q16825 1174 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 PTPROQ16827 1216 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 CTXN3Q4LDR2 81 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 TIGD5Q53EQ6 642 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.2
PHGDH-218ENST00000641491 FIGNQ5HY92 759 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 IQCEQ6IPM2 695 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 ELMSAN1Q6PJG2 1045 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 TMEM270Q6UE05 265 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 DDX53Q86TM3 631 aaKnown RBP13.83□□□□□ -0.2
PHGDH-218ENST00000641491 UNC93AQ86WB7 457 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 ARHGEF19Q8IW93 802 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 DCP1BQ8IZD4 617 aaKnown RBP13.83□□□□□ -0.2
PHGDH-218ENST00000641491 VPS52Q8N1B4 723 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 PDCL2Q8N4E4 241 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 KLHL23Q8NBE8 558 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 ARNTL2Q8WYA1 636 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 RIN2Q8WYP3 895 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-218ENST00000641491 TATDN2Q93075 761 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 HERC2P3Q9BVR0 1158 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 EMILIN2Q9BXX0 1053 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 DEF6Q9H4E7 631 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 APOBEC3GQ9HC16 384 aaKnown RBP13.83□□□□□ -0.2
PHGDH-218ENST00000641491 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.83□□□□□ -0.2
PHGDH-218ENST00000641491 CISHQ9NSE2 258 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 SEPT11Q9NVA2 429 aaKnown RBP13.83□□□□□ -0.2
PHGDH-218ENST00000641491 DDX43Q9NXZ2 648 aaKnown RBP13.83□□□□□ -0.2
PHGDH-218ENST00000641491 MYO6Q9UM54 1294 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 BARX2Q9UMQ3 279 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-218ENST00000641491 CEP83Q9Y592 693 aa13.83□□□□□ -0.2
PHGDH-218ENST00000641491 OR6C75A6NL08 312 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 M0QZQ0 153 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 FERP16591 822 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 WARSP23381 471 aaKnown RBP13.82□□□□□ -0.2
PHGDH-218ENST00000641491 TKTP29401 623 aaKnown RBP13.82□□□□□ -0.2
PHGDH-218ENST00000641491 PLA2G5P39877 138 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 PLCB3Q01970 1234 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 ARID5AQ03989 594 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 GPM6BQ13491 265 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 SMC1AQ14683 1233 aaKnown RBP13.82□□□□□ -0.2
PHGDH-218ENST00000641491 DRAP1Q14919 205 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-218ENST00000641491 ZNF394Q53GI3 561 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 WSCD1Q658N2 575 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 PHLDB3Q6NSJ2 640 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 GJB7Q6PEY0 223 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-218ENST00000641491 C3orf58Q8NDZ4 430 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 HEXIM2Q96MH2 286 aaKnown RBP13.82□□□□□ -0.2
PHGDH-218ENST00000641491 C17orf80Q9BSJ5 609 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 MED10Q9BTT4 135 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 BCO2Q9BYV7 579 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 MARCH5Q9NX47 278 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 L1RE1Q9UN81 338 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 LZTS1Q9Y250 596 aa13.82□□□□□ -0.2
PHGDH-218ENST00000641491 TIMM13Q9Y5L4 95 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-218ENST00000641491 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-218ENST00000641491 F8VZ95 297 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 SPTLC1O15269 473 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 B4GALT3O60512 393 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 IPO7O95373 1038 aaKnown RBP13.81□□□□□ -0.2
PHGDH-218ENST00000641491 ITGB1P05556 798 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 CASP14P31944 242 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 KRT9P35527 623 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 SOX5P35711 763 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 PBX2P40425 430 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 AARSP49588 968 aaKnown RBP eCLIP13.81□□□□□ -0.2
PHGDH-218ENST00000641491 ARPP19P56211 112 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 ERVK-21P61565 698 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 CCDC173Q0VFZ6 552 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 PSMD5Q16401 504 aa13.81□□□□□ -0.2
PHGDH-218ENST00000641491 SOWAHAQ2M3V2 549 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms