RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 STAT4Q14765 748 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 BBS9Q3SYG4 887 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 PPP6R3Q5H9R7 873 aaPredicted RBP14.49□□□□□ -0.09
SCARB2-227ENST00000640957 CDC42EP5Q6NZY7 148 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 ZCCHC23Q6ZST2 131 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 ACAP3Q96P50 834 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 SLC13A1Q9BZW2 595 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 DMAP1Q9NPF5 467 aaPredicted RBP14.49□□□□□ -0.09
SCARB2-227ENST00000640957 DOCK2Q92608 1830 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 DCAF8L1A6NGE4 600 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 E7ENQ6 273 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 SORBS3O60504 671 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 TOP3BO95985 862 aaKnown RBP14.48□□□□□ -0.09
SCARB2-227ENST00000640957 APBA3O96018 575 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 RPA1P27694 616 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 DLG1Q12959 904 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 CDC16Q13042 620 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 UBAP2LQ14157 1087 aaKnown RBP14.48□□□□□ -0.09
SCARB2-227ENST00000640957 RASA2Q15283 850 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 ZC3H3Q8IXZ2 948 aaKnown RBP14.48□□□□□ -0.09
SCARB2-227ENST00000640957 PIP4K2CQ8TBX8 421 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 PANX3Q96QZ0 392 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 HOMER2Q9NSB8 354 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 CYB561D2O14569 222 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 BBOX1O75936 387 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 KIF22Q14807 665 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 SLC45A4Q5BKX6 768 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 LMO3Q8TAP4 145 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 GPRC5CQ9NQ84 441 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 NDE1Q9NXR1 346 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 ZNF711Q9Y462 761 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 SNED1Q8TER0 1413 aa14.48□□□□□ -0.09
SCARB2-227ENST00000640957 LOC100653049A0A140TA62 436 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 ESYT2A0FGR8 921 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 SGK1O00141 431 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 FSCN2O14926 492 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 KRT34O76011 436 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 DSG1Q02413 1049 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 TTLL12Q14166 644 aaPredicted RBP14.47□□□□□ -0.09
SCARB2-227ENST00000640957 CYP1B1Q16678 543 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 SFT2D3Q587I9 215 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 ZBTB46Q86UZ6 589 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 CBWD2Q8IUF1 395 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 ARID3BQ8IVW6 561 aaPredicted RBP14.47□□□□□ -0.09
SCARB2-227ENST00000640957 ECSITQ9BQ95 431 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 PLCH1Q4KWH8 1693 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 FRMPD4Q14CM0 1322 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 E2F8A0AVK6 867 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 GH2P01242 217 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 CYP11B1P15538 503 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 NELFEP18615 380 aaKnown RBP14.47□□□□□ -0.09
SCARB2-227ENST00000640957 VAMP7P51809 220 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 OCRLQ01968 901 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 SP4Q02446 784 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 ZRSR2Q15696 482 aaKnown RBP14.47□□□□□ -0.09
SCARB2-227ENST00000640957 MSS51Q4VC12 460 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 CPXCR1Q8N123 301 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 CFAP57Q96MR6 1250 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 STX18Q9P2W9 335 aaKnown RBP14.47□□□□□ -0.09
SCARB2-227ENST00000640957 C2CD2LO14523 706 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 SUPT3HO75486 399 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 FDX1P10109 184 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 SERPINB6P35237 376 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 AQP4P55087 323 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 DYNC1I2Q13409 638 aaKnown RBP14.47□□□□□ -0.09
SCARB2-227ENST00000640957 PTK6Q13882 451 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 GRAMD1BQ3KR37 738 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 RALGPS1Q5JS13 557 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 C3orf62Q6ZUJ4 267 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 ZNF720Q7Z2F6 126 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 RHPN2Q8IUC4 686 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 TRAPPC9Q96Q05 1148 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 GCNAQ96QF7 691 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 MMP19Q99542 508 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 TIPINQ9BVW5 301 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 TCEAL9Q9UHQ7 104 aa14.47□□□□□ -0.09
SCARB2-227ENST00000640957 A0A1B0GUL6 1792 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 DDTLA6NHG4 134 aaPredicted RBP14.46□□□□□ -0.09
SCARB2-227ENST00000640957 MEIS2O14770 477 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 SLC16A3O15427 465 aaKnown RBP14.46□□□□□ -0.09
SCARB2-227ENST00000640957 RAD17O75943 681 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 HNRNPCP07910 306 aaKnown RBP eCLIP14.46□□□□□ -0.09
SCARB2-227ENST00000640957 GK3PQ14409 553 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 TCHHL1Q5QJ38 904 aaPredicted RBP14.46□□□□□ -0.09
SCARB2-227ENST00000640957 ANKRD22Q5VYY1 191 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 IYDQ6PHW0 289 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 FBXO11Q86XK2 927 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 PRPF31Q8WWY3 499 aaKnown RBP14.46□□□□□ -0.09
SCARB2-227ENST00000640957 PTCD3Q96EY7 689 aaKnown RBP14.46□□□□□ -0.09
SCARB2-227ENST00000640957 OSBPL8Q9BZF1 889 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 VCX3BQ9H321 246 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 LIN28AQ9H9Z2 209 aaKnown RBP14.46□□□□□ -0.09
SCARB2-227ENST00000640957 VCX3AQ9NNX9 186 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 APPL1Q9UKG1 709 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 F5H6K3 240 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 ZNF862O60290 1169 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 TRPA1O75762 1119 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 MAP3K6O95382 1288 aa14.46□□□□□ -0.09
SCARB2-227ENST00000640957 LMNAP02545 664 aaKnown RBP14.46□□□□□ -0.09
SCARB2-227ENST00000640957 GSTA2P09210 222 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms