RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 NEK11Q8NG66 645 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 OLIG1Q8TAK6 271 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 SAMD11Q96NU1 681 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 DNAJC7Q99615 494 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 PKMYT1Q99640 499 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 SYT11Q9BT88 431 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 ZBED2Q9BTP6 218 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 PBX4Q9BYU1 374 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 UBE2TQ9NPD8 197 aaPredicted RBP9.76□□□□□ -0.85
SCARB2-225ENST00000640900 SPG21Q9NZD8 308 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 AIPL1Q9NZN9 384 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 STK39Q9UEW8 545 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 BARX2Q9UMQ3 279 aaPredicted RBP9.76□□□□□ -0.85
SCARB2-225ENST00000640900 LZTS1Q9Y250 596 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 PRG3Q9Y2Y8 225 aaPredicted RBP9.76□□□□□ -0.85
SCARB2-225ENST00000640900 RWDD3Q9Y3V2 267 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 SNX9Q9Y5X1 595 aa9.76□□□□□ -0.85
SCARB2-225ENST00000640900 SF3B1O75533 1304 aaKnown RBP eCLIP9.76□□□□□ -0.85
SCARB2-225ENST00000640900 NLRC5Q86WI3 1866 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 CDH23Q9H251 3354 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 NT5C1B-RDH14C9J2C7 533 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 TRAPPC3O43617 180 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 TADA2AO75478 443 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 SOD2P04179 222 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 CA3P07451 260 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 WEE2P0C1S8 567 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 TRIM21P19474 475 aaKnown RBP9.75□□□□□ -0.85
SCARB2-225ENST00000640900 PBX2P40425 430 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 PBX3P40426 434 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 PRKCIP41743 596 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 MFAP3P55082 362 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 CDH8P55286 799 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 ZBED6P86452 979 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 PLCB2Q00722 1185 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 DSG1Q02413 1049 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 LRMPQ12912 555 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 CAMK1Q14012 370 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 RAB30Q15771 203 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 MEA1Q16626 185 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 KIAA0319Q5VV43 1072 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 E4F1Q66K89 784 aaPredicted RBP9.75□□□□□ -0.85
SCARB2-225ENST00000640900 FUT10Q6P4F1 479 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 PDXDC1Q6P996 788 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.75□□□□□ -0.85
SCARB2-225ENST00000640900 TAS1R1Q7RTX1 841 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 IRF2BP2Q7Z5L9 587 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 PPM1KQ8N3J5 372 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 TC2NQ8N9U0 490 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 APPL2Q8NEU8 664 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 PPP1R9BQ96SB3 815 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 MRPL45Q9BRJ2 306 aaKnown RBP9.75□□□□□ -0.85
SCARB2-225ENST00000640900 HERC2P3Q9BVR0 1158 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 NUCKS1Q9H1E3 243 aaKnown RBP9.75□□□□□ -0.85
SCARB2-225ENST00000640900 AAASQ9NRG9 546 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 CISHQ9NSE2 258 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 NXF1Q9UBU9 619 aaKnown RBP9.75□□□□□ -0.85
SCARB2-225ENST00000640900 DSEQ9UL01 958 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 STXBP5LQ9Y2K9 1186 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 IRAK3Q9Y616 596 aa9.75□□□□□ -0.85
SCARB2-225ENST00000640900 ARHGEF37A1IGU5 675 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 I3L4J1 428 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 HUS1O60921 280 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 FGF18O76093 207 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 ODC1P11926 461 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 TKTP29401 623 aaKnown RBP9.74□□□□□ -0.85
SCARB2-225ENST00000640900 CASP14P31944 242 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 CLCN1P35523 988 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 SOX5P35711 763 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 LHX1P48742 406 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 RAD23BP54727 409 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 YWHAEP62258 255 aaKnown RBP9.74□□□□□ -0.85
SCARB2-225ENST00000640900 TNNC1P63316 161 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 CDK17Q00537 523 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 UBE3AQ05086 875 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 HGSNATQ68CP4 663 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 FAM171BQ6P995 826 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 WDR59Q6PJI9 974 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 TMC6Q7Z403 805 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 SPRED2Q7Z698 418 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 DRC7Q8IY82 874 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 ADGRF2Q8IZF7 708 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 KLHL23Q8NBE8 558 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 SPPL3Q8TCT6 385 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 PIK3R5Q8WYR1 880 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 DDX1Q92499 740 aaKnown RBP9.74□□□□□ -0.85
SCARB2-225ENST00000640900 TWNKQ96RR1 684 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 TGS1Q96RS0 853 aaKnown RBP9.74□□□□□ -0.85
SCARB2-225ENST00000640900 ZSWIM1Q9BR11 485 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 ACBD6Q9BR61 282 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 OXCT2Q9BYC2 517 aaPredicted RBP9.74□□□□□ -0.85
SCARB2-225ENST00000640900 ELOVL4Q9GZR5 314 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 RXFP1Q9HBX9 757 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.74□□□□□ -0.85
SCARB2-225ENST00000640900 HMGXB4Q9UGU5 601 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 LUC7L2Q9Y383 392 aaKnown RBP9.74□□□□□ -0.85
SCARB2-225ENST00000640900 R3HCC1Q9Y3T6 440 aaKnown RBP9.74□□□□□ -0.85
SCARB2-225ENST00000640900 PCDHB12Q9Y5F1 795 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 BACE2Q9Y5Z0 518 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 TRIOBPQ9H2D6 2365 aa9.74□□□□□ -0.85
SCARB2-225ENST00000640900 H3BNC9 293 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms