RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 OGDHQ02218 1023 aa17.48■□□□□ 0.39
HNRNPU-228ENST00000640306 KCNT1Q5JUK3 1230 aa17.48■□□□□ 0.39
HNRNPU-228ENST00000640306 TEX2Q8IWB9 1127 aa17.48■□□□□ 0.39
HNRNPU-228ENST00000640306 SUPT20HQ8NEM7 779 aa17.48■□□□□ 0.39
HNRNPU-228ENST00000640306 SLITRK1Q96PX8 696 aa17.48■□□□□ 0.39
HNRNPU-228ENST00000640306 SMC6Q96SB8 1091 aa17.48■□□□□ 0.39
HNRNPU-228ENST00000640306 DNALI1O14645 258 aaPredicted RBP17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 GARTP22102 1010 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 BRD2P25440 801 aaKnown RBP17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 POLGP54098 1239 aaPredicted RBP17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 ZNF252P-AS1Q0IIN9 211 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 SCARA5Q6ZMJ2 495 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 RTKN2Q8IZC4 609 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 BBOF1Q8ND07 529 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 ZNF526Q8TF50 670 aaPredicted RBP17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 ATP6V0A1Q93050 837 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 SENP7Q9BQF6 1050 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 FAM167BQ9BTA0 163 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 PIM2Q9P1W9 311 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 NKX1-2Q9UD57 310 aaPredicted RBP17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 FBXO40Q9UH90 709 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 A0A1B0GUA9 196 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 H0Y3Z8 333 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 ZBED4O75132 1171 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 RGS20O76081 388 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 EGFRP00533 1210 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 EDN1P05305 212 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 POTEJP0CG39 1038 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 SSTR1P30872 391 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 NRLP54845 237 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 OVGP1Q12889 678 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 SETDB1Q15047 1291 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 PLEKHA7Q6IQ23 1121 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 ZNF606Q8WXB4 792 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 LRRC37BQ96QE4 947 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 GMLQ99445 158 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 MSTO1Q9BUK6 570 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 KIAA1683Q9H0B3 1180 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 DCTN4Q9UJW0 460 aa17.47■□□□□ 0.39
HNRNPU-228ENST00000640306 LOXHD1Q8IVV2 1947 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 WNT10BO00744 389 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 DGAT1O75907 488 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 UPP2O95045 317 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 STBD1O95210 358 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 MKRN3Q13064 507 aaKnown RBP17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 SPARCL1Q14515 664 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 RNF43Q68DV7 783 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 RPAINQ86UA6 219 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 ZNF677Q86XU0 584 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 LRRC8CQ8TDW0 803 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 MAK16Q9BXY0 300 aaKnown RBP17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 ZWILCHQ9H900 591 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 ARHGAP28Q9P2N2 729 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 TTLL13PA6NNM8 815 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 CST3P01034 146 aaPredicted RBP17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 ALADP13716 330 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 KRT4P19013 534 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 CETN2P41208 172 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 PTP4A2Q12974 167 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 PSMD6Q15008 389 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 WDR72Q3MJ13 1102 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 HHATQ5VTY9 493 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 ZBTB33Q86T24 672 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 ASAP3Q8TDY4 903 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 PARVAQ9NVD7 372 aa17.46■□□□□ 0.39
HNRNPU-228ENST00000640306 ZC3H11AO75152 810 aaKnown RBP eCLIP17.45■□□□□ 0.385e-7■■□□□ 13.1
HNRNPU-228ENST00000640306 CCND1P24385 295 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 ACTR2P61160 394 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 LVRNQ6Q4G3 990 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.45■□□□□ 0.389e-17■□□□□ 10
HNRNPU-228ENST00000640306 PLCD4Q9BRC7 762 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 JPH1Q9HDC5 661 aaPredicted RBP17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 NPHS2Q9NP85 383 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 NCOA4Q13772 614 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 TFDP1Q14186 410 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 ANKRD22Q5VYY1 191 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 TRIM68Q6AZZ1 485 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 SPOCD1Q6ZMY3 1216 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 VSIG10LQ86VR7 867 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 MCPH1Q8NEM0 835 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 CCHCR1Q8TD31 782 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 ZNF668Q96K58 619 aaPredicted RBP17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 DONSONQ9NYP3 566 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 SCINQ9Y6U3 715 aa17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 COL2A1P02458 1487 aaPredicted RBP17.45■□□□□ 0.38
HNRNPU-228ENST00000640306 K7ERI5 159 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 TJP3O95049 919 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 WEE2P0C1S8 567 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 KCNA2P16389 499 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 ATP2A2P16615 1042 aaKnown RBP17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 EPHB2P29323 1055 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 CCND2P30279 289 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 TNFSF9P41273 254 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 GDF10P55107 478 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 EMC2Q15006 297 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 SNRNP48Q6IEG0 339 aaKnown RBP17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 DNAJC24Q6P3W2 148 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 ALLCQ8N6M5 410 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 TJP2Q9UDY2 1190 aa17.44■□□□□ 0.38
HNRNPU-228ENST00000640306 ZMYND8Q9ULU4 1186 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms