RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 DIS3LQ8TF46 1054 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 SNRNP27Q8WVK2 155 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 JPH3Q8WXH2 748 aaPredicted RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 GATAD2BQ8WXI9 593 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 POMGNT1Q8WZA1 660 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 TRIM5Q9C035 493 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 PCIF1Q9H4Z3 704 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 NGRNQ9NPE2 291 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 TRPV2Q9Y5S1 764 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 CDY2AQ9Y6F7 541 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 A0A0B4J269 797 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 M0QZ92 97 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 HAX1O00165 279 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ABLIM1O14639 778 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 CLDN3O15551 220 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 TSPAN1O60635 241 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 EXOC3O60645 756 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ERLIN2O94905 339 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 SERPINC1P01008 464 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 CD4P01730 458 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ZSCAN20P17040 1043 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ARF4P18085 180 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 FGFR4P22455 802 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 PROZP22891 400 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 MTIF2P46199 727 aaKnown RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 IDH3AP50213 366 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 MPP2Q14168 576 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 PCBP1Q15365 356 aaKnown RBP eCLIP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 HIF1AQ16665 826 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ATF7IP2Q5U623 682 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 HGSNATQ68CP4 663 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 FRMD5Q7Z6J6 570 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 NLRP8Q86W28 1048 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 TRIM59Q8IWR1 403 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 XXYLT1Q8NBI6 393 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ANKRD20A12PQ8NF67 263 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 BORCS6Q96GS4 357 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ZBTB45Q96K62 511 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 TUBGCP2Q9BSJ2 902 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 HAPLN2Q9GZV7 340 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ABCB6Q9NP58 842 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 IFNKQ9P0W0 207 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ANKFY1Q9P2R3 1169 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 TNFSF13BQ9Y275 285 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 A0A1B0GTH6 734 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 TMEM238LA0A1B0GVL6 79 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 GPR39O43194 453 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 TLL1O43897 1013 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ADCY5O95622 1261 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 EPB41P11171 864 aaKnown RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 CAPN2P17655 700 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 SFPQP23246 707 aaKnown RBP eCLIP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 HOXA11P31270 313 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 PSMC2P35998 433 aaKnown RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ZNF75DP51815 510 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 COPB1P53618 953 aaKnown RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 UBASH3AP57075 661 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 RPS26P62854 115 aaKnown RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 CCDC40Q4G0X9 1142 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 EEF1DP3Q658K8 133 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 CXorf57Q6NSI4 855 aaKnown RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 MPZL3Q6UWV2 235 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 SLC39A5Q6ZMH5 540 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 GK5Q6ZS86 529 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 CATSPER4Q7RTX7 472 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 FAM186BQ8IYM0 893 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ANKRD42Q8N9B4 389 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 PMEPA1Q969W9 287 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 SAAL1Q96ER3 474 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 FBXL18Q96ME1 805 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 CLUHP3Q96NS8 147 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 TCHPQ9BT92 498 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 XPO4Q9C0E2 1151 aaKnown RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 CEP44Q9C0F1 390 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 INTS7Q9NVH2 962 aaKnown RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 INTS13Q9NVM9 706 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 TAB2Q9NYJ8 693 aa8.61□□□□□ -1.03
SCARB2-220ENST00000640076 ARMCX3Q9UH62 379 aaPredicted RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 AGO2Q9UKV8 859 aaKnown RBP8.61□□□□□ -1.03
SCARB2-220ENST00000640076 MROH7Q68CQ1 1323 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 A0A1B0GUA9 196 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 A0A1W2PQH9 124 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 FAM221AA4D161 298 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 GOLGA8IPA6NC78 632 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 GOLGA8JA6NMD2 632 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 KIAA0391O15091 583 aaKnown RBP8.6□□□□□ -1.03
SCARB2-220ENST00000640076 MAPK13O15264 365 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 FAM189A1O60320 539 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 ADRB2P07550 413 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 CKBP12277 381 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 CCNFP41002 786 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 MATR3P43243 847 aaKnown RBP eCLIP8.6□□□□□ -1.03
SCARB2-220ENST00000640076 COPS2P61201 443 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 CLCQ05315 142 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 NOLC1Q14978 699 aaKnown RBP eCLIP8.6□□□□□ -1.03
SCARB2-220ENST00000640076 SNRNP35Q16560 246 aaKnown RBP8.6□□□□□ -1.03
SCARB2-220ENST00000640076 MAN2A1Q16706 1144 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 ZNF568Q3ZCX4 644 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 MIIPQ5JXC2 388 aa8.6□□□□□ -1.03
SCARB2-220ENST00000640076 ANKRD33Q7Z3H0 272 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms