RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 CCDC177Q9NQR7 707 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-220ENST00000639841 PRR13Q9NZ81 148 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 DPP7Q9UHL4 492 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 RPS6KA6Q9UK32 745 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 PCDHA2Q9Y5H9 948 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 TMPRSS2O15393 492 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 ERAL1O75616 437 aaKnown RBP8.08□□□□□ -1.12
NECAP1-220ENST00000639841 HNRNPA1P09651 372 aaKnown RBP eCLIP8.08□□□□□ -1.12
NECAP1-220ENST00000639841 FGFR4P22455 802 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 PNLIPRP1P54315 467 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 SUMO3P55854 103 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-220ENST00000639841 CHRNDQ07001 517 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 PCSK7Q16549 785 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 CPZQ66K79 652 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 MBLAC2Q68D91 279 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 GPAT2Q6NUI2 795 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 KIAA1211Q6ZU35 1233 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 SP8Q8IXZ3 490 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 FANCBQ8NB91 859 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 DPF2Q92785 391 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 C16orf92Q96LL3 132 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 CYP4F11Q9HBI6 524 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 TOR4AQ9NXH8 423 aa8.08□□□□□ -1.12
NECAP1-220ENST00000639841 RRP15Q9Y3B9 282 aaKnown RBP8.08□□□□□ -1.12
NECAP1-220ENST00000639841 ZFP37Q9Y6Q3 630 aaPredicted RBP8.08□□□□□ -1.12
NECAP1-220ENST00000639841 KRBA1A5PL33 1030 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 FAM177BA6PVY3 158 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 CELF2O95319 508 aaKnown RBP8.07□□□□□ -1.12
NECAP1-220ENST00000639841 CD3EP07766 207 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 ITGA5P08648 1049 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 IFNGR1P15260 489 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 ACSL1P33121 698 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 AFF3P51826 1226 aaKnown RBP8.07□□□□□ -1.12
NECAP1-220ENST00000639841 RNASE9P60153 205 aaKnown RBP8.07□□□□□ -1.12
NECAP1-220ENST00000639841 CCT2P78371 535 aaKnown RBP8.07□□□□□ -1.12
NECAP1-220ENST00000639841 AP1B1Q10567 949 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 ADAM9Q13443 819 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 TUSC3Q13454 348 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 ACVR2BQ13705 512 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 SEC23AQ15436 765 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 GLIPR1L2Q4G1C9 344 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 CCDC157Q569K6 752 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 ZNF783Q6ZMS7 281 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 LYSMD2Q8IV50 215 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 ZZZ3Q8IYH5 903 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 ADGRG2Q8IZP9 1017 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 RNF214Q8ND24 703 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 SNIP1Q8TAD8 396 aaKnown RBP8.07□□□□□ -1.12
NECAP1-220ENST00000639841 CYP2W1Q8TAV3 490 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 DSCC1Q9BVC3 393 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 MCOLN1Q9GZU1 580 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 USP36Q9P275 1121 aaKnown RBP8.07□□□□□ -1.12
NECAP1-220ENST00000639841 TMPRSS11EQ9UL52 423 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 PCDHB1Q9Y5F3 818 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 FLT1P17948 1338 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 ZNF609O15014 1411 aa8.07□□□□□ -1.12
NECAP1-220ENST00000639841 LRRC37AA6NMS7 1700 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 ABCC12Q96J65 1359 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 PRSS38A1L453 326 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 H0Y626 953 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 ELL2O00472 640 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-220ENST00000639841 SPTLC2O15270 562 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 CSF1P09603 554 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 SLFN14P0C7P3 912 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 BMP2P12643 396 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 STMN1P16949 149 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 CHMP24386 653 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 ABCD1P33897 745 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 CCR9P51686 369 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 PRKAA2P54646 552 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 FKBP1BP68106 108 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 ID3Q02535 119 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 KIAA2012Q0VF49 1180 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 CUL4BQ13620 913 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 RAB30Q15771 203 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 CTXN3Q4LDR2 81 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 CC2D1BQ5T0F9 858 aaKnown RBP8.06□□□□□ -1.12
NECAP1-220ENST00000639841 SLC22A25Q6T423 547 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 IL27RAQ6UWB1 636 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 DPP8Q6V1X1 898 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-220ENST00000639841 BTN2A1Q7KYR7 527 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 TMC3Q7Z5M5 1100 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 ZNF34Q8IZ26 560 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 CELF5Q8N6W0 485 aaKnown RBP8.06□□□□□ -1.12
NECAP1-220ENST00000639841 OR1N1Q8NGS0 311 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 SLC35A4Q96G79 324 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 RAX2Q96IS3 184 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 FBXL18Q96ME1 805 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 SLX1AQ9BQ83 275 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 UTP14AQ9BVJ6 771 aaKnown RBP8.06□□□□□ -1.12
NECAP1-220ENST00000639841 ACSS2Q9NR19 701 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 SNX8Q9Y5X2 465 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 B3GALT1Q9Y5Z6 326 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 A0A1W2PPL8 197 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 HNRNPDLO14979 420 aaKnown RBP8.06□□□□□ -1.12
NECAP1-220ENST00000639841 TPP2P29144 1249 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-220ENST00000639841 STAT5AP42229 794 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 EPS15P42566 896 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 CTSKP43235 329 aa8.06□□□□□ -1.12
NECAP1-220ENST00000639841 CCT4P50991 539 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms