RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 SV2AQ7L0J3 742 aa23.41■■□□□ 1.34
SCN1B-206ENST00000638536 LIMS2Q7Z4I7 341 aa23.41■■□□□ 1.34
SCN1B-206ENST00000638536 DSEQ9UL01 958 aa23.41■■□□□ 1.34
SCN1B-206ENST00000638536 LOC730098B7Z3J9 87 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 CETN3O15182 167 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 HUS1O60921 280 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 SSTR3P32745 418 aaPredicted RBP23.4■■□□□ 1.34
SCN1B-206ENST00000638536 STX17P56962 302 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 NTHL1P78549 312 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 MYO1EQ12965 1108 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 GPR17Q13304 367 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 BIRC3Q13489 604 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 CCDC142Q17RM4 750 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 ZACNQ401N2 412 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 TPGS2Q68CL5 300 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 METTL23Q86XA0 190 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 TTC9BQ8N6N2 239 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 DHTKD1Q96HY7 919 aaPredicted RBP23.4■■□□□ 1.34
SCN1B-206ENST00000638536 HCFC1R1Q9NWW0 138 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 AFF4Q9UHB7 1163 aaKnown RBP23.4■■□□□ 1.34
SCN1B-206ENST00000638536 NME7Q9Y5B8 376 aa23.4■■□□□ 1.34
SCN1B-206ENST00000638536 PSMA7O14818 248 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 LRRN2O75325 713 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 ACAT1P24752 427 aaKnown RBP23.39■■□□□ 1.33
SCN1B-206ENST00000638536 UVSSAQ2YD98 709 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 TTI2Q6NXR4 508 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 INTS8Q75QN2 995 aaKnown RBP23.39■■□□□ 1.33
SCN1B-206ENST00000638536 TCEAL8Q8IYN2 117 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 ATAD1Q8NBU5 361 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 KBTBD7Q8WVZ9 684 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 NELFBQ8WX92 580 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 NECTIN4Q96NY8 510 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 TSG101Q99816 390 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 GTPBP4Q9BZE4 634 aaKnown RBP23.39■■□□□ 1.33
SCN1B-206ENST00000638536 ZCWPW1Q9H0M4 648 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 TMLHEQ9NVH6 421 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 POLIQ9UNA4 740 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 CTNND2Q9UQB3 1225 aa23.39■■□□□ 1.33
SCN1B-206ENST00000638536 R3HCC1Q9Y3T6 440 aaKnown RBP23.39■■□□□ 1.33
SCN1B-206ENST00000638536 N4BP1O75113 896 aaKnown RBP23.38■■□□□ 1.33
SCN1B-206ENST00000638536 PHACTR2O75167 634 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 GCLMP48507 274 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 MCCD1P59942 119 aaPredicted RBP23.38■■□□□ 1.33
SCN1B-206ENST00000638536 FKBP3Q00688 224 aaKnown RBP23.38■■□□□ 1.33
SCN1B-206ENST00000638536 LRRC63Q05C16 580 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 TRPC3Q13507 836 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 NCOA4Q13772 614 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 WDR72Q3MJ13 1102 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 SLC39A12Q504Y0 691 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 ELMSAN1Q6PJG2 1045 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 GRASPQ7Z6J2 395 aaPredicted RBP23.38■■□□□ 1.33
SCN1B-206ENST00000638536 ADGRF2Q8IZF7 708 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 TOP6BLQ8N6T0 577 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 MMRN2Q9H8L6 949 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 PIDD1Q9HB75 910 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 WDR6Q9NNW5 1121 aaKnown RBP23.38■■□□□ 1.33
SCN1B-206ENST00000638536 DDX43Q9NXZ2 648 aaKnown RBP23.38■■□□□ 1.33
SCN1B-206ENST00000638536 SLC27A5Q9Y2P5 690 aa23.38■■□□□ 1.33
SCN1B-206ENST00000638536 ARHGEF37A1IGU5 675 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 MTMR11A4FU01 709 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 C2CD4DB7Z1M9 353 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 TNFRSF10AO00220 468 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 PRRG1O14668 218 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 GABRDO14764 452 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 IKBKBO14920 756 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 HNRNPA1P09651 372 aaKnown RBP eCLIP23.37■■□□□ 1.33
SCN1B-206ENST00000638536 LMO2P25791 158 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 ELF1P32519 619 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 DUSP4Q13115 394 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 STIM1Q13586 685 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 THEM5Q8N1Q8 247 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 MED15Q96RN5 788 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 MRPL45Q9BRJ2 306 aaKnown RBP23.37■■□□□ 1.33
SCN1B-206ENST00000638536 MKNK1Q9BUB5 465 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 OXCT2Q9BYC2 517 aaPredicted RBP23.37■■□□□ 1.33
SCN1B-206ENST00000638536 RHOBTB2Q9BYZ6 727 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.37■■□□□ 1.33
SCN1B-206ENST00000638536 INSL5Q9Y5Q6 135 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 SOAT2O75908 522 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 HOXA9P31269 272 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 AP3M2P53677 418 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 CCDC149Q6ZUS6 474 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 TRIML1Q8N9V2 468 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 MMS19Q96T76 1030 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 NUP62CLQ9H1M0 184 aa23.37■■□□□ 1.33
SCN1B-206ENST00000638536 DNMT3BQ9UBC3 853 aaKnown RBP23.37■■□□□ 1.33
SCN1B-206ENST00000638536 NXF1Q9UBU9 619 aaKnown RBP23.37■■□□□ 1.33
SCN1B-206ENST00000638536 KRT13P13646 458 aa23.36■■□□□ 1.33
SCN1B-206ENST00000638536 SPOPLQ6IQ16 392 aa23.36■■□□□ 1.33
SCN1B-206ENST00000638536 TMEM86AQ8N2M4 240 aa23.36■■□□□ 1.33
SCN1B-206ENST00000638536 PI4K2AQ9BTU6 479 aa23.36■■□□□ 1.33
SCN1B-206ENST00000638536 CLUHO75153 1309 aa23.35■■□□□ 1.33
SCN1B-206ENST00000638536 NRG2O14511 850 aaPredicted RBP23.35■■□□□ 1.33
SCN1B-206ENST00000638536 ATP2C2O75185 946 aa23.35■■□□□ 1.33
SCN1B-206ENST00000638536 STAU1O95793 577 aaKnown RBP23.35■■□□□ 1.33
SCN1B-206ENST00000638536 HLA-DRAP01903 254 aa23.35■■□□□ 1.33
SCN1B-206ENST00000638536 EPB41P11171 864 aaKnown RBP23.35■■□□□ 1.33
SCN1B-206ENST00000638536 CYP26C1Q6V0L0 522 aa23.35■■□□□ 1.33
SCN1B-206ENST00000638536 DPH6Q7L8W6 267 aa23.35■■□□□ 1.33
SCN1B-206ENST00000638536 TAS1R2Q8TE23 839 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms