RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 FBXO42Q6P3S6 717 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 C7orf31Q8N865 590 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 PGBD4Q96DM1 585 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 L3MBTL3Q96JM7 780 aaPredicted RBP15.73■□□□□ 0.11
UBE3A-227ENST00000638011 TIPINQ9BVW5 301 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 CASZ1Q86V15 1759 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.73■□□□□ 0.11
UBE3A-227ENST00000638011 TARSP26639 723 aaKnown RBP15.73■□□□□ 0.11
UBE3A-227ENST00000638011 PTPN4P29074 926 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 LRRC74BQ6ZQY2 392 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 TAF8Q7Z7C8 310 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 UBASH3BQ8TF42 649 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 CRNNQ9UBG3 495 aaPredicted RBP15.73■□□□□ 0.11
UBE3A-227ENST00000638011 TRIM49BA6NDI0 452 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 TRIM49D1C9J1S8 452 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 SNAPC5O75971 98 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 CASP4P49662 377 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 FAM89AQ96GI7 184 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 PAK5Q9P286 719 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 NXF1Q9UBU9 619 aaKnown RBP15.73■□□□□ 0.11
UBE3A-227ENST00000638011 TTC37Q6PGP7 1564 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 MSH3P20585 1137 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 IL12AP29459 219 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 EID3Q8N140 333 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 USP13Q92995 863 aaPredicted RBP15.73■□□□□ 0.11
UBE3A-227ENST00000638011 RFT1Q96AA3 541 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 E2F7Q96AV8 911 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 NEURL1BA8MQ27 555 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 MYL4P12829 197 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 RASA1P20936 1047 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 LRRC74AQ0VAA2 488 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 TBCKQ8TEA7 893 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 DCUN1D1Q96GG9 259 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 LRRIQ1Q96JM4 1722 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 WHRNQ9P202 907 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 HBS1LQ9Y450 684 aaKnown RBP15.73■□□□□ 0.11
UBE3A-227ENST00000638011 GUCA1AP43080 201 aaPredicted RBP15.72■□□□□ 0.11
UBE3A-227ENST00000638011 SCFD2Q8WU76 684 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 SYN2Q92777 582 aaPredicted RBP15.72■□□□□ 0.11
UBE3A-227ENST00000638011 AMACRQ9UHK6 382 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 XPO7Q9UIA9 1087 aaKnown RBP15.72■□□□□ 0.11
UBE3A-227ENST00000638011 KDM5CP41229 1560 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 FASP25445 335 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 SNX30Q5VWJ9 437 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 ERP44Q9BS26 406 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 SLC16A3O15427 465 aaKnown RBP15.72■□□□□ 0.11
UBE3A-227ENST00000638011 ZAP70P43403 619 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 SENP7Q9BQF6 1050 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 MCM8Q9UJA3 840 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 CARD8Q9Y2G2 431 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 ZNF518AQ6AHZ1 1483 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 CNTN1Q12860 1018 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 ARHGEF19Q8IW93 802 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 RASSF5Q8WWW0 418 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 COMMD8Q9NX08 183 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 RAD54BQ9Y620 910 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 CDC42BPBQ9Y5S2 1711 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 PABPC3Q9H361 631 aaKnown RBP15.72■□□□□ 0.11
UBE3A-227ENST00000638011 GGA2Q9UJY4 613 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 GSTK1Q9Y2Q3 226 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 UBE2QL1A1L167 161 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 POTEIP0CG38 1075 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 OTUD4Q01804 1114 aaKnown RBP15.72■□□□□ 0.11
UBE3A-227ENST00000638011 BTKQ06187 659 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 TRAPPC3LQ5T215 181 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 ELOA2Q8IYF1 753 aaPredicted RBP15.72■□□□□ 0.11
UBE3A-227ENST00000638011 SH3KBP1Q96B97 665 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 MAGED2Q9UNF1 606 aaPredicted RBP15.72■□□□□ 0.11
UBE3A-227ENST00000638011 EFCAB10A6NFE3 127 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 FTLP02792 175 aaPredicted RBP15.72■□□□□ 0.11
UBE3A-227ENST00000638011 ATP1A3P13637 1013 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 ZBTB49Q6ZSB9 765 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 OSCP1Q8WVF1 389 aa15.72■□□□□ 0.11
UBE3A-227ENST00000638011 PAIP1Q9H074 479 aaKnown RBP15.72■□□□□ 0.11
UBE3A-227ENST00000638011 SF3B3Q15393 1217 aaKnown RBP15.71■□□□□ 0.11
UBE3A-227ENST00000638011 AGAP9Q5VTM2 703 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 SKA1Q96BD8 255 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 CHID1Q9BWS9 393 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 ARMC7Q9H6L4 198 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 TLR7Q9NYK1 1049 aaKnown RBP15.71■□□□□ 0.11
UBE3A-227ENST00000638011 CD109Q6YHK3 1445 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 PDS5AQ29RF7 1337 aaKnown RBP15.71■□□□□ 0.11
UBE3A-227ENST00000638011 WWP2O00308 870 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 CLDN3O15551 220 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 RPS6P62753 249 aaKnown RBP15.71■□□□□ 0.11
UBE3A-227ENST00000638011 XRCC4Q13426 336 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 STILQ15468 1287 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 KNOP1Q1ED39 458 aaKnown RBP15.71■□□□□ 0.11
UBE3A-227ENST00000638011 LRRC6Q86X45 466 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 ERO1BQ86YB8 467 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 EIF4E1BA6NMX2 242 aaKnown RBP15.71■□□□□ 0.11
UBE3A-227ENST00000638011 TEX46H3BTG2 121 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 VIL1P09327 827 aaKnown RBP15.71■□□□□ 0.11
UBE3A-227ENST00000638011 GSTA3Q16772 222 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 DPP8Q6V1X1 898 aaPredicted RBP15.71■□□□□ 0.11
UBE3A-227ENST00000638011 YTHDF3Q7Z739 585 aaKnown RBP15.71■□□□□ 0.11
UBE3A-227ENST00000638011 KCTD17Q8N5Z5 321 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 ANKRD49Q8WVL7 239 aa15.71■□□□□ 0.11
UBE3A-227ENST00000638011 SLITRK2Q9H156 845 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms