RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 ODC1P11926 461 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 GABRR2P28476 465 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 WEE1P30291 646 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 KPNA1P52294 538 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 CCINQ13939 588 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 LRRC32Q14392 662 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 GPR158Q5T848 1215 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 C9orf57Q5W0N0 161 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 ARL6IP4Q66PJ3 421 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 MCTP1Q6DN14 999 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 PRR23BQ6ZRT6 265 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 LONP2Q86WA8 852 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 RALGPS2Q86X27 583 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 TTC8Q8TAM2 541 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 ZCWPW1Q9H0M4 648 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 ATXN3LQ9H3M9 355 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 IL21Q9HBE4 155 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 OBP2AQ9NY56 170 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 GTSE1Q9NYZ3 720 aa13.16□□□□□ -0.3
CACNA1A-250ENST00000637809 K7ENM7 598 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 SLC26A4O43511 780 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 FGF19O95750 216 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 ATF6P18850 670 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 SCP2P22307 547 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 PAX3P23760 479 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 HOXA6P31267 233 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 CNR2P34972 360 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 TNK2Q07912 1038 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 SIM2Q14190 667 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 ARHGAP29Q52LW3 1261 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 DGKKQ5KSL6 1271 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 GPBP1Q86WP2 473 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 CD302Q8IX05 232 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 CDK5RAP3Q96JB5 506 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 AK8Q96MA6 479 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 LPIN3Q9BQK8 851 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 MSTO1Q9BUK6 570 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 TASP1Q9H6P5 420 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 SEMA4GQ9NTN9 838 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 BLOC1S4Q9NUP1 217 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 DERAQ9Y315 318 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 LAMA1P25391 3075 aa13.15□□□□□ -0.3
CACNA1A-250ENST00000637809 CFAP47Q6ZTR5 3102 aa13.15□□□□□ -0.31
CACNA1A-250ENST00000637809 ANKRD63C9JTQ0 380 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 SLC30A4O14863 429 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 TRAK2O60296 914 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 CDR1P51861 262 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 CYP4F8P98187 520 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 GTF2BQ00403 316 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 PON2Q15165 354 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 CSRP2Q16527 193 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 SLC39A12Q504Y0 691 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 ITIH5Q86UX2 942 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 LRRTM3Q86VH5 581 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 MYCT1Q8N699 235 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 NETO1Q8TDF5 533 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 BPIFB1Q8TDL5 484 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 SEPT5Q99719 369 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 SLC46A2Q9BY10 475 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 SMG9Q9H0W8 520 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 PARVGQ9HBI0 331 aa13.14□□□□□ -0.31
CACNA1A-250ENST00000637809 TICRRQ7Z2Z1 1910 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 CHD8Q9HCK8 2581 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 TISP43B9A030 160 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 DPYSL4O14531 572 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 FAM13AO94988 1023 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 ADRB1P08588 477 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 NMT1P30419 496 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 TUFMP49411 452 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 ACOT2P49753 483 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 GRIN1Q05586 938 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 DHX8Q14562 1220 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 MCM6Q14566 821 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 TMEM132DQ14C87 1099 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 MGAT5BQ3V5L5 792 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 ARHGAP15Q53QZ3 475 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 HEATR6Q6AI08 1181 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 PKN3Q6P5Z2 889 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 PRR23CQ6ZRP0 262 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 TMEM150AQ86TG1 271 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 WDR5BQ86VZ2 330 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 SYNPOQ8N3V7 929 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 CHFRQ96EP1 664 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 FAM83CQ9BQN1 747 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 IKZF4Q9H2S9 585 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 ASB7Q9H672 318 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 C2CD2Q9Y426 696 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 KIF3AQ9Y496 699 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 STYXL1Q9Y6J8 313 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 CACNA1BQ00975 2339 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 CITO14578 2027 aa13.13□□□□□ -0.31
CACNA1A-250ENST00000637809 PDCD11Q14690 1871 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 OTOL1A6NHN0 477 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 CYB561D2O14569 222 aa13.12□□□□□ -0.31
CACNA1A-250ENST00000637809 EXTL3O43909 919 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms