RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 THEM5Q8N1Q8 247 aa23.96■■□□□ 1.43
CHRNA7-231ENST00000637786 TTC39CQ8N584 583 aa23.96■■□□□ 1.43
CHRNA7-231ENST00000637786 KBTBD7Q8WVZ9 684 aa23.96■■□□□ 1.43
CHRNA7-231ENST00000637786 AUTS2Q8WXX7 1259 aa23.96■■□□□ 1.43
CHRNA7-231ENST00000637786 TATDN2Q93075 761 aa23.96■■□□□ 1.43
CHRNA7-231ENST00000637786 PPP2R3CQ969Q6 453 aa23.96■■□□□ 1.43
CHRNA7-231ENST00000637786 FAM81BQ96LP2 452 aa23.96■■□□□ 1.43
CHRNA7-231ENST00000637786 EMILIN2Q9BXX0 1053 aa23.96■■□□□ 1.43
CHRNA7-231ENST00000637786 SMYD3Q9H7B4 428 aa23.96■■□□□ 1.43
CHRNA7-231ENST00000637786 RTN4Q9NQC3 1192 aaKnown RBP23.96■■□□□ 1.43
CHRNA7-231ENST00000637786 MTCH2Q9Y6C9 303 aa23.96■■□□□ 1.43
CHRNA7-231ENST00000637786 CDH23Q9H251 3354 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 OR6C75A6NL08 312 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 C1RP00736 705 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 SLC9A1P19634 815 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 GCNT1Q02742 428 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 CTXN3Q4LDR2 81 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 SMYD5Q6GMV2 418 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 ELMO3Q96BJ8 720 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 ERGIC2Q96RQ1 377 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 CDX2Q99626 313 aaPredicted RBP23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 RBSNQ9H1K0 784 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 NSUN3Q9H649 340 aaKnown RBP23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 MTMR10Q9NXD2 777 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 FBXL5Q9UKA1 691 aa23.95■■□□□ 1.42
CHRNA7-231ENST00000637786 HIDE1A8MVS5 230 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 CNPP09543 421 aaKnown RBP23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 NDUFV1P49821 464 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 UBXN1Q04323 297 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 INCA1Q0VD86 236 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 KCNMA1Q12791 1236 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 CUL2Q13617 745 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 SLC8B1Q6J4K2 584 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 SCARA5Q6ZMJ2 495 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 JAKMIP2Q96AA8 810 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 GUCD1Q96NT3 240 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 CLSTN3Q9BQT9 956 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 MRPL45Q9BRJ2 306 aaKnown RBP23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 APEX2Q9UBZ4 518 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 PCDHGC5Q9Y5F6 944 aa23.94■■□□□ 1.42
CHRNA7-231ENST00000637786 FSD2A1L4K1 749 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 TEX28O15482 410 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 ADH1AP07327 375 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 PCSK1P29120 753 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 CA8P35219 290 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 GNL1P36915 607 aaPredicted RBP23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 YWHAEP62258 255 aaKnown RBP23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 PHLDB3Q6NSJ2 640 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 ENOSF1Q7L5Y1 443 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 KLHL5Q96PQ7 755 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 CDCA3Q99618 268 aaPredicted RBP23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 RTP3Q9BQQ7 232 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 ACBD6Q9BR61 282 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 SDCBP2Q9H190 292 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 SNX25Q9H3E2 840 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 PLCB1Q9NQ66 1216 aa23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 DDX43Q9NXZ2 648 aaKnown RBP23.93■■□□□ 1.42
CHRNA7-231ENST00000637786 CSPG5O95196 566 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 WEE2P0C1S8 567 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 RFX1P22670 979 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 CDH8P55286 799 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 UBASH3AP57075 661 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 LRMPQ12912 555 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 NR1I3Q14994 352 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 DPY19L2P1Q6NXN4 242 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 PPFIBP1Q86W92 1011 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 UNC93AQ86WB7 457 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 OSTM1Q86WC4 334 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 PPM1KQ8N3J5 372 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 OR6B3Q8NGW1 331 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 NAP1L5Q96NT1 182 aaPredicted RBP23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 SIX2Q9NPC8 291 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 BARX2Q9UMQ3 279 aaPredicted RBP23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 SIK3Q9Y2K2 1263 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 STXBP5LQ9Y2K9 1186 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 DAAM1Q9Y4D1 1078 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 CDY1Q9Y6F8 540 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 SZT2Q5T011 3432 aa23.92■■□□□ 1.42
CHRNA7-231ENST00000637786 IGFBP4P22692 258 aa23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 OR1D2P34982 312 aa23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 RAP1GAPP47736 663 aa23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 RAB33AQ14088 237 aa23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 DUSP6Q16828 381 aa23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 RSPO2Q6UXX9 243 aaPredicted RBP23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 ADGRD2Q7Z7M1 963 aa23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 ARHGEF19Q8IW93 802 aa23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 MYLIPQ8WY64 445 aa23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 ARID3AQ99856 593 aa23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 TLE6Q9H808 572 aa23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 CDH9Q9ULB4 789 aa23.91■■□□□ 1.42
CHRNA7-231ENST00000637786 A0A1W2PQC6 194 aa23.9■■□□□ 1.42
CHRNA7-231ENST00000637786 TEX33O43247 280 aa23.9■■□□□ 1.42
CHRNA7-231ENST00000637786 TPM3P06753 285 aa23.9■■□□□ 1.42
CHRNA7-231ENST00000637786 RPL17P18621 184 aaKnown RBP23.9■■□□□ 1.42
CHRNA7-231ENST00000637786 MFAP3P55082 362 aa23.9■■□□□ 1.42
CHRNA7-231ENST00000637786 TSPY1Q01534 308 aa23.9■■□□□ 1.42
CHRNA7-231ENST00000637786 SYCP1Q15431 976 aa23.9■■□□□ 1.42
CHRNA7-231ENST00000637786 KLHDC7AQ5VTJ3 777 aa23.9■■□□□ 1.42
CHRNA7-231ENST00000637786 OR10T2Q8NGX3 314 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms