RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 WEE1P30291 646 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 PLCB2Q00722 1185 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 SIM2Q14190 667 aaPredicted RBP19.36■□□□□ 0.69
CIITA-215ENST00000637439 VEPH1Q14D04 833 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 STXBP5Q5T5C0 1151 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 GPR158Q5T848 1215 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 C9orf57Q5W0N0 161 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 JADE1Q6IE81 842 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 PRR23BQ6ZRT6 265 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 GAREM2Q75VX8 874 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 PARD6AQ9NPB6 346 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 ZMYM5Q9UJ78 669 aa19.36■□□□□ 0.69
CIITA-215ENST00000637439 PIRO00625 290 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 PPEF2O14830 753 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 CDC25CP30307 473 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 CTHP32929 405 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 SPEM2Q0P670 501 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 SMARCB1Q12824 385 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 GAS6Q14393 721 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 TMEM132DQ14C87 1099 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 RABEP1Q15276 862 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 METTL23Q86XA0 190 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 SYNPOQ8N3V7 929 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 C2orf15Q8WU43 125 aaKnown RBP19.35■□□□□ 0.69
CIITA-215ENST00000637439 GCNAQ96QF7 691 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 MKNK1Q9BUB5 465 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 ASB7Q9H672 318 aa19.35■□□□□ 0.69
CIITA-215ENST00000637439 THG1LQ9NWX6 298 aaKnown RBP19.35■□□□□ 0.69
CIITA-215ENST00000637439 ANO9A1A5B4 782 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 FOXD2O60548 495 aaPredicted RBP19.34■□□□□ 0.69
CIITA-215ENST00000637439 TBCAO75347 108 aaKnown RBP19.34■□□□□ 0.69
CIITA-215ENST00000637439 BMP15O95972 392 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 SOX9P48436 509 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 GTF2BQ00403 316 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 DHX8Q14562 1220 aaKnown RBP19.34■□□□□ 0.69
CIITA-215ENST00000637439 PTPAQ15257 358 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 TAF12Q16514 161 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 LPAL2Q16609 132 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 SLC39A12Q504Y0 691 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 SLFN12LQ6IEE8 588 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 LONP2Q86WA8 852 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 THEM5Q8N1Q8 247 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 TTC9BQ8N6N2 239 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 RASSF8Q8NHQ8 419 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 BPIFB1Q8TDL5 484 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 TMEM209Q96SK2 561 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 SEPT5Q99719 369 aaPredicted RBP19.34■□□□□ 0.69
CIITA-215ENST00000637439 ZCWPW1Q9H0M4 648 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 ZHX3Q9H4I2 956 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 TASP1Q9H6P5 420 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 C2CD2Q9Y426 696 aa19.34■□□□□ 0.69
CIITA-215ENST00000637439 CHURC1-FNTBB4DL54 471 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 SOAT2O75908 522 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 NFICP08651 508 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 GJB2P29033 226 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 HOXA6P31267 233 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 LONP1P36776 959 aaKnown RBP19.33■□□□□ 0.68
CIITA-215ENST00000637439 FNTBP49356 437 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 POU5F1Q01860 360 aaKnown RBP19.33■□□□□ 0.68
CIITA-215ENST00000637439 MGAT5BQ3V5L5 792 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 SLC39A4Q6P5W5 647 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 OR10T2Q8NGX3 314 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 NETO1Q8TDF5 533 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 RBM12Q9NTZ6 932 aaKnown RBP19.33■□□□□ 0.68
CIITA-215ENST00000637439 BLOC1S4Q9NUP1 217 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 GTSE1Q9NYZ3 720 aa19.33■□□□□ 0.68
CIITA-215ENST00000637439 TSC2P49815 1807 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 K7ESF4 209 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 HRO43593 1189 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 ACOT2P49753 483 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 TAF6P49848 677 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 MCM6Q14566 821 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 ADALQ6DHV7 355 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 TXNDC11Q6PKC3 985 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.32■□□□□ 0.68
CIITA-215ENST00000637439 GPIHBP1Q8IV16 184 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 SPPL2BQ8TCT7 592 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 RAD54LQ92698 747 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 TMX3Q96JJ7 454 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 ZFYVE19Q96K21 471 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 LRRC3BQ96PB8 259 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 CCSER1Q9C0I3 900 aa19.32■□□□□ 0.68
CIITA-215ENST00000637439 ANK1P16157 1881 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 DCDC2BA2VCK2 349 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 CYB561D2O14569 222 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 PLCG1P19174 1290 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 MCM2P49736 904 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 CCINQ13939 588 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 PON2Q15165 354 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 CSRP2Q16527 193 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 ITPRIPL2Q3MIP1 535 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 Q6ZS52 159 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 DCP1BQ8IZD4 617 aaKnown RBP19.31■□□□□ 0.68
CIITA-215ENST00000637439 TTC8Q8TAM2 541 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 FIZ1Q96SL8 496 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 LPIN3Q9BQK8 851 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 PYM1Q9BRP8 204 aaKnown RBP19.31■□□□□ 0.68
CIITA-215ENST00000637439 ST6GALNAC4Q9H4F1 302 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 SEMA4GQ9NTN9 838 aa19.31■□□□□ 0.68
CIITA-215ENST00000637439 DPP3Q9NY33 737 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms