RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 ADH1AP07327 375 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 NDUFV1P49821 464 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 MRE11P49959 708 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 ARPP19P56211 112 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 KCNH2Q12809 1159 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 KCNJ12Q14500 433 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 SOWAHAQ2M3V2 549 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 SGSM1Q2NKQ1 1148 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 ZNF667Q5HYK9 610 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 EP400NLQ6ZTU2 488 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 PALB2Q86YC2 1186 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 TOP6BLQ8N6T0 577 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 FBXL13Q8NEE6 735 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 VN1R2Q8NFZ6 395 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 CDCA3Q99618 268 aaPredicted RBP18.45■□□□□ 0.54
CLN6-218ENST00000637223 VRTNQ9H8Y1 702 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 RAB20Q9NX57 234 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 FBXL5Q9UKA1 691 aa18.45■□□□□ 0.54
CLN6-218ENST00000637223 TBC1D4O60343 1298 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 N4BP1O75113 896 aaKnown RBP18.44■□□□□ 0.54
CLN6-218ENST00000637223 ASS1P00966 412 aaKnown RBP18.44■□□□□ 0.54
CLN6-218ENST00000637223 EPCAMP16422 314 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 OR1D2P34982 312 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 ZNF165P49910 485 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 NCAPHQ15003 741 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 CDKAL1Q5VV42 579 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 SCARA5Q6ZMJ2 495 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 OSTM1Q86WC4 334 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 ADGRF2Q8IZF7 708 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 EFHBQ8N7U6 833 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 CCDC150Q8NCX0 1101 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 TAF4BQ92750 862 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 BPIFA3Q9BQP9 254 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 IMPG2Q9BZV3 1241 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 SMYD3Q9H7B4 428 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 APOBEC3GQ9HC16 384 aaKnown RBP18.44■□□□□ 0.54
CLN6-218ENST00000637223 CLDND1Q9NY35 253 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 HCFC2Q9Y5Z7 792 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 TRANK1O15050 2925 aa18.44■□□□□ 0.54
CLN6-218ENST00000637223 ATG2AQ2TAZ0 1938 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 PRR33A8MZF0 331 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 OR4Q2P0C623 313 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 PRKCSHP14314 528 aaPredicted RBP18.43■□□□□ 0.54
CLN6-218ENST00000637223 RAP1GAPP47736 663 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 CLCN4P51793 760 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 NOP14P78316 857 aaKnown RBP18.43■□□□□ 0.54
CLN6-218ENST00000637223 TCP11X2Q5H9J9 407 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 PPFIBP1Q86W92 1011 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 DHX40Q8IX18 779 aaKnown RBP18.43■□□□□ 0.54
CLN6-218ENST00000637223 TMEM86AQ8N2M4 240 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 SLC22A17Q8WUG5 538 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 TMEM209Q96SK2 561 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 RTP3Q9BQQ7 232 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 MRPL45Q9BRJ2 306 aaKnown RBP18.43■□□□□ 0.54
CLN6-218ENST00000637223 COQ4Q9Y3A0 265 aa18.43■□□□□ 0.54
CLN6-218ENST00000637223 SCN1AP35498 2009 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 TGM5O43548 720 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 HCRTO43612 131 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 GLP2RO95838 553 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 GLUD1P00367 558 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 SPATA31D3P0C874 917 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 EEF1GP26641 437 aaKnown RBP18.42■□□□□ 0.54
CLN6-218ENST00000637223 CDH8P55286 799 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 ROR1Q01973 937 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 ADAM15Q13444 863 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 MAN2A1Q16706 1144 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 WDR44Q5JSH3 913 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 SLC8B1Q6J4K2 584 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 SPATA31D4Q6ZUB0 917 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 DPH6Q7L8W6 267 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 LIMS2Q7Z4I7 341 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 THEM5Q8N1Q8 247 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 OR10T2Q8NGX3 314 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 KBTBD7Q8WVZ9 684 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 PABPC5Q96DU9 382 aaKnown RBP18.42■□□□□ 0.54
CLN6-218ENST00000637223 TUBGCP2Q9BSJ2 902 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 SDCBP2Q9H190 292 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 DDX43Q9NXZ2 648 aaKnown RBP18.42■□□□□ 0.54
CLN6-218ENST00000637223 TAB2Q9NYJ8 693 aa18.42■□□□□ 0.54
CLN6-218ENST00000637223 BARX2Q9UMQ3 279 aaPredicted RBP18.42■□□□□ 0.54
CLN6-218ENST00000637223 VWA8A3KMH1 1905 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 WDR27A2RRH5 827 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 OR6C75A6NL08 312 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 SMTNL1A8MU46 457 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 P4HA2O15460 535 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 NCK2O43639 380 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 P4HA1P13674 534 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 CPB1P15086 417 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 WARSP23381 471 aaKnown RBP18.41■□□□□ 0.54
CLN6-218ENST00000637223 ACAT1P24752 427 aaKnown RBP18.41■□□□□ 0.54
CLN6-218ENST00000637223 ASPAP45381 313 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 CDR1P51861 262 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 DLX2Q07687 328 aaPredicted RBP18.41■□□□□ 0.54
CLN6-218ENST00000637223 CETN1Q12798 172 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 LRMPQ12912 555 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 KCNC3Q14003 757 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 RAB33AQ14088 237 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 CTC1Q2NKJ3 1217 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 VWA3BQ502W6 1294 aa18.41■□□□□ 0.54
CLN6-218ENST00000637223 NIF3L1Q9GZT8 377 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms