RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 TRAPPC3O43617 180 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 USO1O60763 962 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 LRP3O75074 770 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 MICAL2O94851 1124 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 ABLIM3O94929 683 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 LRG1P02750 347 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 FCARP24071 287 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 TKTP29401 623 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 CXCL12P48061 93 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 CLCNKBP51801 687 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 PRPF4BQ13523 1007 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 SIM2Q14190 667 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 MAPK6Q16659 721 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 UPP1Q16831 310 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 FAM78AQ5JUQ0 283 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 PRSS36Q5K4E3 855 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 CDCA2Q69YH5 1023 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 ATCAYQ86WG3 371 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 MAP4K3Q8IVH8 894 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 TCEAL4Q96EI5 215 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 CITED4Q96RK1 184 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 CORO1BQ9BR76 489 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 TTC12Q9H892 705 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 ZNF334Q9HCZ1 680 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 TRPV5Q9NQA5 729 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 SEMA4GQ9NTN9 838 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 USP20Q9Y2K6 914 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 CYP46A1Q9Y6A2 500 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 ARID2Q68CP9 1835 aa10.09□□□□□ -0.79
CACNA1A-236ENST00000637117 I3L4J1 428 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 ACKR2O00590 384 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 NRG2O14511 850 aaPredicted RBP10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 CDKL5O76039 1030 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 CHRNB1P11230 501 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 ATF2P15336 505 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 PSMC3P17980 439 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 LIG1P18858 919 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 ATP2B1P20020 1258 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 GDI1P31150 447 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 TXKP42681 527 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 BRCC3P46736 316 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 ARPP19P56211 112 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 SATB1Q01826 763 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 SCRN1Q12765 414 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 CSRP2Q16527 193 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 CALCRLQ16602 461 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 GLRA4Q5JXX5 417 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 CYP4A22Q5TCH4 519 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 EEF1DP3Q658K8 133 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 SLC8B1Q6J4K2 584 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 PRR23CQ6ZRP0 262 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 PDZD4Q76G19 769 aaPredicted RBP10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 ZSWIM3Q96MP5 696 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 UROC1Q96N76 676 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 PPP1R10Q96QC0 940 aaKnown RBP10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 C2orf40Q9H1Z8 148 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 CYP4F11Q9HBI6 524 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 PIAS3Q9Y6X2 628 aa10.08□□□□□ -0.8
CACNA1A-236ENST00000637117 RALGAPA1Q6GYQ0 2036 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 WDR27A2RRH5 827 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 CHURC1-FNTBB4DL54 471 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 ZNF263O14978 683 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 DTNBO60941 627 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 REC8O95072 547 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 SEC24AO95486 1093 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 PRKCBP05771 671 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 SPATA31C1P0DKV0 1188 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 CCNE1P24864 410 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 CNR2P34972 360 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 GPC1P35052 558 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 VIPR2P41587 438 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 CCR2P41597 374 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 PLA2G4AP47712 749 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 FNTBP49356 437 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 ROR1Q01973 937 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 GAS6Q14393 721 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 C11orf91Q3C1V1 193 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 DCAF4L1Q3SXM0 396 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 VITQ6UXI7 678 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 ETFBKMTQ8IXQ9 262 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 TCEAL8Q8IYN2 117 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 SPEM1Q8N4L4 309 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 DEPTORQ8TB45 409 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 BSNDQ8WZ55 320 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 DDX1Q92499 740 aaKnown RBP10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 SMARCD2Q92925 531 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 ZNF512Q96ME7 567 aaPredicted RBP10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 INSM2Q96T92 566 aaPredicted RBP10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 GOLGA2P5Q9HBQ8 144 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 PDRG1Q9NUG6 133 aa10.07□□□□□ -0.8
CACNA1A-236ENST00000637117 ZFHX4Q86UP3 3567 aa10.06□□□□□ -0.8
CACNA1A-236ENST00000637117 CNOT1A5YKK6 2376 aaKnown RBP10.06□□□□□ -0.8
CACNA1A-236ENST00000637117 SMIM28A0A1B0GU29 152 aa10.06□□□□□ -0.8
CACNA1A-236ENST00000637117 FOXD2O60548 495 aaPredicted RBP10.06□□□□□ -0.8
CACNA1A-236ENST00000637117 EDN1P05305 212 aa10.06□□□□□ -0.8
CACNA1A-236ENST00000637117 KRT2P35908 639 aa10.06□□□□□ -0.8
CACNA1A-236ENST00000637117 NAMPTP43490 491 aa10.06□□□□□ -0.8
CACNA1A-236ENST00000637117 MLLT6P55198 1093 aaPredicted RBP10.06□□□□□ -0.8
CACNA1A-236ENST00000637117 DMWDQ09019 674 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms