RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CT47A1Q5JQC4 288 aaPredicted RBP13.66□□□□□ -0.22
CTSD-208ENST00000636843 BEST2Q8NFU1 509 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 ATRIPQ8WXE1 791 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 SMARCD2Q92925 531 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 IRF7Q92985 503 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 SMARCE1Q969G3 411 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 RMDN1Q96DB5 314 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 TSPAN18Q96SJ8 248 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 TRPV5Q9NQA5 729 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 ASAH2Q9NR71 780 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 ZSCAN32Q9NX65 697 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 TUBGCP4Q9UGJ1 667 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 UBQLN1Q9UMX0 589 aaKnown RBP13.66□□□□□ -0.22
CTSD-208ENST00000636843 CITO14578 2027 aa13.66□□□□□ -0.22
CTSD-208ENST00000636843 GPR179Q6PRD1 2367 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 VWA3AA6NCI4 1184 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 XPOTO43592 962 aaKnown RBP13.65□□□□□ -0.22
CTSD-208ENST00000636843 YWHAHQ04917 246 aaPredicted RBP13.65□□□□□ -0.22
CTSD-208ENST00000636843 FZD5Q13467 585 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 ZBTB6Q15916 424 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 TMEM119Q4V9L6 283 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 RNF19BQ6ZMZ0 732 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 HS6ST3Q8IZP7 471 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 MLKLQ8NB16 471 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 ZBTB44Q8NCP5 570 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 SPATA20Q8TB22 786 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 DEPDC1BQ8WUY9 529 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 NELL1Q92832 810 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 KIF12Q96FN5 646 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 BICD1Q96G01 975 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 GPR88Q9GZN0 384 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 TRPV4Q9HBA0 871 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 CEP72Q9P209 647 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 ODF2LQ9ULJ1 636 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 F5P12259 2224 aa13.65□□□□□ -0.22
CTSD-208ENST00000636843 OR6C75A6NL08 312 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 SHISA7A6NL88 538 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 CACNA1AO00555 2505 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 MOSPD3O75425 235 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 MYL4P12829 197 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 PSMC3P17980 439 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 TXLNAP40222 546 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 AARSP49588 968 aaKnown RBP eCLIP13.64□□□□□ -0.23
CTSD-208ENST00000636843 NCKAP1LP55160 1127 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 MYL5Q02045 173 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 PPP2R3AQ06190 1150 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 PLD1Q13393 1074 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 GRM2Q14416 872 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 PUM1Q14671 1186 aaKnown RBP eCLIP13.64□□□□□ -0.23
CTSD-208ENST00000636843 MAMSTRQ6ZN01 415 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 USP49Q70CQ1 688 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 HAUS6Q7Z4H7 955 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 USP37Q86T82 979 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 MAP4K3Q8IVH8 894 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 PDILTQ8N807 584 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 E2F7Q96AV8 911 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 DHX58Q96C10 678 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 EPSTI1Q96J88 318 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 DCHS1Q96JQ0 3298 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 AK8Q96MA6 479 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 ZSWIM3Q96MP5 696 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 PLIN2Q99541 437 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 IER2Q9BTL4 223 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 FAM126AQ9BYI3 521 aaPredicted RBP13.64□□□□□ -0.23
CTSD-208ENST00000636843 HAPLN2Q9GZV7 340 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 ZNF334Q9HCZ1 680 aaPredicted RBP13.64□□□□□ -0.23
CTSD-208ENST00000636843 PRMT8Q9NR22 394 aaPredicted RBP13.64□□□□□ -0.23
CTSD-208ENST00000636843 MAN1B1Q9UKM7 699 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 LILRB5O75023 590 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 PIGRP01833 764 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 ADRB2P07550 413 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 PAX3P23760 479 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 GDI1P31150 447 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 LIG4P49917 911 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 MORC3Q14149 939 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 DHX8Q14562 1220 aaKnown RBP13.64□□□□□ -0.23
CTSD-208ENST00000636843 NCAPHQ15003 741 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 ARSHQ5FYA8 562 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 VITQ6UXI7 678 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 DGLUCYQ7Z3D6 616 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 ZNF687Q8N1G0 1237 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 DCLK2Q8N568 766 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 GPR161Q8N6U8 529 aaKnown RBP13.64□□□□□ -0.23
CTSD-208ENST00000636843 IQUBQ8NA54 791 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 SECISBP2LQ93073 1101 aaKnown RBP13.64□□□□□ -0.23
CTSD-208ENST00000636843 ZNF830Q96NB3 372 aaPredicted RBP13.64□□□□□ -0.23
CTSD-208ENST00000636843 CHRDQ9H2X0 955 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 RPF1Q9H9Y2 349 aaKnown RBP13.64□□□□□ -0.23
CTSD-208ENST00000636843 NCDNQ9UBB6 729 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 YIPF1Q9Y548 306 aa13.64□□□□□ -0.23
CTSD-208ENST00000636843 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
CTSD-208ENST00000636843 NPHP3-ACAD11A0A0J9YXS1 232 aa13.63□□□□□ -0.23
CTSD-208ENST00000636843 LACTBL1A8MY62 500 aa13.63□□□□□ -0.23
CTSD-208ENST00000636843 NRG2O14511 850 aaPredicted RBP13.63□□□□□ -0.23
CTSD-208ENST00000636843 ZNF263O14978 683 aa13.63□□□□□ -0.23
CTSD-208ENST00000636843 OGTO15294 1046 aa13.63□□□□□ -0.23
CTSD-208ENST00000636843 TYMPP19971 482 aa13.63□□□□□ -0.23
CTSD-208ENST00000636843 TNFSF9P41273 254 aa13.63□□□□□ -0.23
CTSD-208ENST00000636843 EPHB3P54753 998 aa13.63□□□□□ -0.23
CTSD-208ENST00000636843 MLLT6P55198 1093 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms