RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ZNF558Q96NG5 402 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 ERGIC2Q96RQ1 377 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 APOL6Q9BWW8 343 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 MTMR12Q9C0I1 747 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 HSD3B7Q9H2F3 369 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 IKZF4Q9H2S9 585 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 PLCB1Q9NQ66 1216 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 FBXL5Q9UKA1 691 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 LZTS1Q9Y250 596 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 SF3B1O75533 1304 aaKnown RBP eCLIP7.23□□□□□ -1.25
UPF3B-205ENST00000636792 MKI67P46013 3256 aaKnown RBP7.23□□□□□ -1.25
UPF3B-205ENST00000636792 COL4A4P53420 1690 aaPredicted RBP7.22□□□□□ -1.25
UPF3B-205ENST00000636792 CEP290O15078 2479 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 PLXNA4Q9HCM2 1894 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 A0A1B0GTH6 734 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 PIRO00625 290 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 SYN3O14994 580 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 MEFVO15553 781 aaPredicted RBP7.22□□□□□ -1.25
UPF3B-205ENST00000636792 PHACTR2O75167 634 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 C1RP00736 705 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 ASS1P00966 412 aaKnown RBP7.22□□□□□ -1.25
UPF3B-205ENST00000636792 SERPINC1P01008 464 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 PIK3CAP42336 1068 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 COPB1P53618 953 aaKnown RBP7.22□□□□□ -1.25
UPF3B-205ENST00000636792 YWHAEP62258 255 aaKnown RBP7.22□□□□□ -1.25
UPF3B-205ENST00000636792 TFAMQ00059 246 aaKnown RBP7.22□□□□□ -1.25
UPF3B-205ENST00000636792 PLCB3Q01970 1234 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 GCNT1Q02742 428 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 CREMQ03060 361 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 PPP3CAQ08209 521 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 BIRC3Q13489 604 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 TRPC3Q13507 836 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 TRIM14Q14142 442 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 BMS1Q14692 1282 aaKnown RBP7.22□□□□□ -1.25
UPF3B-205ENST00000636792 KRT31Q15323 416 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 SHHQ15465 462 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 UPP1Q16831 310 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 SGSM1Q2NKQ1 1148 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 TUSC1Q2TAM9 212 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 VWA3BQ502W6 1294 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 EPC2Q52LR7 807 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 SEZ6Q53EL9 994 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 FIGNQ5HY92 759 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 WDR44Q5JSH3 913 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 MIIPQ5JXC2 388 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 TDRD10Q5VZ19 366 aaKnown RBP7.22□□□□□ -1.25
UPF3B-205ENST00000636792 C9orf57Q5W0N0 161 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 PDE12Q6L8Q7 609 aaKnown RBP7.22□□□□□ -1.25
UPF3B-205ENST00000636792 DCLRE1AQ6PJP8 1040 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 TMEM86AQ8N2M4 240 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 CXorf38Q8TB03 319 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 RNF217Q8TC41 542 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 PLEKHO2Q8TD55 490 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 LPPQ93052 612 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 CCDC127Q96BQ5 260 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 ZMAT2Q96NC0 199 aaKnown RBP7.22□□□□□ -1.25
UPF3B-205ENST00000636792 ARHGAP9Q9BRR9 750 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 COLEC11Q9BWP8 271 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 CWH43Q9H720 699 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 RAB20Q9NX57 234 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 GDAP2Q9NXN4 497 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 DPP3Q9NY33 737 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 CXXC1Q9P0U4 656 aaPredicted RBP7.22□□□□□ -1.25
UPF3B-205ENST00000636792 MSRAQ9UJ68 235 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 ADAM28Q9UKQ2 775 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 DSEQ9UL01 958 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 SSX2IPQ9Y2D8 614 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 INPP5FQ9Y2H2 1132 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 PCDHB12Q9Y5F1 795 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 VWA8A3KMH1 1905 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 ITIH6Q6UXX5 1313 aa7.22□□□□□ -1.25
UPF3B-205ENST00000636792 MEIS3P2A8K0S8 358 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 M0QZQ0 153 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 PODXLO00592 558 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 ALDH2P05091 517 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 ITGB3P05106 788 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 CYP11A1P05108 521 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 TRIM49P0CI25 452 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 TRIM49CP0CI26 452 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 ODC1P11926 461 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 TYMPP19971 482 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 BCAR1P56945 870 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 NOP14P78316 857 aaKnown RBP7.21□□□□□ -1.26
UPF3B-205ENST00000636792 DLG4P78352 724 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 FANCCQ00597 558 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 KRT17Q04695 432 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 SMARCB1Q12824 385 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 NCOA4Q13772 614 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 QPCTQ16769 361 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 EXOC3L4Q17RC7 722 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 ZNF699Q32M78 642 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 ZNF667Q5HYK9 610 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 GLRA4Q5JXX5 417 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 C9orf50Q5SZB4 431 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 C1orf220Q5T0J3 134 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 FOXR1Q6PIV2 292 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 KCNT2Q6UVM3 1135 aa7.21□□□□□ -1.26
UPF3B-205ENST00000636792 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.21□□□□□ -1.26
UPF3B-205ENST00000636792 APTXQ7Z2E3 356 aaKnown RBP7.21□□□□□ -1.26
UPF3B-205ENST00000636792 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms