RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 SPATA18Q8TC71 538 aa11.95□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ERCC4Q92889 916 aaPredicted RBP11.95□□□□□ -0.5
SRP54-AS1-205ENST00000636540 CCDC127Q96BQ5 260 aa11.95□□□□□ -0.5
SRP54-AS1-205ENST00000636540 PGLYRP2Q96PD5 576 aa11.95□□□□□ -0.5
SRP54-AS1-205ENST00000636540 MYADMQ96S97 322 aa11.95□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ZCWPW1Q9H0M4 648 aa11.95□□□□□ -0.5
SRP54-AS1-205ENST00000636540 CRISPLD1Q9H336 500 aa11.95□□□□□ -0.5
SRP54-AS1-205ENST00000636540 CYP4F11Q9HBI6 524 aa11.95□□□□□ -0.5
SRP54-AS1-205ENST00000636540 HCFC1R1Q9NWW0 138 aa11.95□□□□□ -0.5
SRP54-AS1-205ENST00000636540 MAPK8IP1Q9UQF2 711 aa11.95□□□□□ -0.5
SRP54-AS1-205ENST00000636540 PCDHA5Q9Y5H7 936 aa11.95□□□□□ -0.5
SRP54-AS1-205ENST00000636540 GREB1Q4ZG55 1949 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 MAPK13O15264 365 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 KINO60870 393 aaKnown RBP11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 SMC2O95347 1197 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 LRG1P02750 347 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 TNNI1P19237 187 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 NR2F2P24468 414 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ELF1P32519 619 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 CLDN10P78369 228 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ZNF658Q5TYW1 1059 aaPredicted RBP11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 TDRD10Q5VZ19 366 aaKnown RBP11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 TRAPPC11Q7Z392 1133 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 LIMS2Q7Z4I7 341 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 METTL23Q86XA0 190 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ADGRF2Q8IZF7 708 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 TMEM86AQ8N2M4 240 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 TTC9BQ8N6N2 239 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 TOP6BLQ8N6T0 577 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 PARD3BQ8TEW8 1205 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ZNF516Q92618 1163 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 SMARCE1Q969G3 411 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ACSF2Q96CM8 615 aaPredicted RBP11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 C1QTNF1Q9BXJ1 281 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 EPS15L1Q9UBC2 864 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 DNMT3BQ9UBC3 853 aaKnown RBP11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 HOOK1Q9UJC3 728 aaKnown RBP11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 POLIQ9UNA4 740 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 SNX9Q9Y5X1 595 aa11.94□□□□□ -0.5
SRP54-AS1-205ENST00000636540 KIF26AQ9ULI4 1882 aaPredicted RBP11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ZNF318Q5VUA4 2279 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 FAM86C2PA6NEL3 165 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 AKAP3O75969 853 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 STAU1O95793 577 aaKnown RBP11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ASGR2P07307 311 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 RHOP08100 348 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 FSHRP23945 695 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 PRCPP42785 496 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 UBE2HP62256 183 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 TWF1Q12792 350 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 MYO1EQ12965 1108 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 MTMR3Q13615 1198 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 SLC5A9Q2M3M2 681 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 SOWAHAQ2M3V2 549 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 EDRF1Q3B7T1 1238 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 PABPC1LQ4VXU2 614 aaKnown RBP11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 SLC39A12Q504Y0 691 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 CEP135Q66GS9 1140 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 OSTM1Q86WC4 334 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 TMC2Q8TDI7 906 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 KBTBD7Q8WVZ9 684 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 HPDLQ96IR7 371 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 XYLT2Q9H1B5 865 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 DNAJC25Q9H1X3 360 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 AVENQ9NQS1 362 aaPredicted RBP11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 HSFX1Q9UBD0 423 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 SORCS3Q9UPU3 1222 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 COL4A2P08572 1712 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 PATJQ8NI35 1801 aa11.93□□□□□ -0.5
SRP54-AS1-205ENST00000636540 GABRDO14764 452 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 GPR37L1O60883 481 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 HUS1O60921 280 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 GBP2P32456 591 aaPredicted RBP11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 AP3M2P53677 418 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 DLG4P78352 724 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ZXDAP98168 799 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 PLD1Q13393 1074 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 INTS6LQ5JSJ4 861 aaKnown RBP11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 PRSS36Q5K4E3 855 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 C1orf220Q5T0J3 134 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 CENPPQ6IPU0 288 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 NPAS3Q8IXF0 933 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ZC3H3Q8IXZ2 948 aaKnown RBP11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 THEM5Q8N1Q8 247 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ATAD1Q8NBU5 361 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 ITFG1Q8TB96 612 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 C2orf15Q8WU43 125 aaKnown RBP11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 EDAQ92838 391 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 PKMYT1Q99640 499 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 GTPBP4Q9BZE4 634 aaKnown RBP11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 VRTNQ9H8Y1 702 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 DDX43Q9NXZ2 648 aaKnown RBP11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 CEP72Q9P209 647 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 LIMD1Q9UGP4 676 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 MAN1B1Q9UKM7 699 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 CDH7Q9ULB5 785 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 FRMD4BQ9Y2L6 1034 aa11.92□□□□□ -0.5
SRP54-AS1-205ENST00000636540 NRG2O14511 850 aaPredicted RBP11.91□□□□□ -0.5
SRP54-AS1-205ENST00000636540 HCRTO43612 131 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms