RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 DEPDC1BQ8WUY9 529 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 DNASE1L2Q92874 299 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 IRF7Q92985 503 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 E2F7Q96AV8 911 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 GCNAQ96QF7 691 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 HSFX1Q9UBD0 423 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 SLC27A5Q9Y2P5 690 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 F5P12259 2224 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 TSC2P49815 1807 aa19.34■□□□□ 0.69
PNKP-225ENST00000636214 CACNA1IQ9P0X4 2223 aa19.33■□□□□ 0.69
PNKP-225ENST00000636214 GJA1P17302 382 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 PSMC3P17980 439 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 MAGEA9P43362 315 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 FOXD4L6Q3SYB3 417 aaPredicted RBP19.33■□□□□ 0.68
PNKP-225ENST00000636214 FOXD4L3Q6VB84 417 aaPredicted RBP19.33■□□□□ 0.68
PNKP-225ENST00000636214 ZNF852Q6ZMS4 543 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 C1orf210Q8IVY1 113 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 KCNG4Q8TDN1 519 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 C2orf15Q8WU43 125 aaKnown RBP19.33■□□□□ 0.68
PNKP-225ENST00000636214 TMEM209Q96SK2 561 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 OSBPL6Q9BZF3 934 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 PLA2G2FQ9BZM2 168 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 PCIF1Q9H4Z3 704 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 MAGEF1Q9HAY2 307 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 LTB4R2Q9NPC1 389 aa19.33■□□□□ 0.68
PNKP-225ENST00000636214 A0A1W2PRU2 124 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 GOLGA8IPA6NC78 632 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 GOLGA8JA6NMD2 632 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 FAM170BA6NMN3 283 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 DPYSL4O14531 572 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 HUS1O60921 280 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 KRT19P08727 400 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 POLR2BP30876 1174 aaKnown RBP19.32■□□□□ 0.68
PNKP-225ENST00000636214 ME1P48163 572 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 WSCD1Q658N2 575 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 GPD1LQ8N335 351 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 OR10T2Q8NGX3 314 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 SHKBP1Q8TBC3 707 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 SPPL2BQ8TCT7 592 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 PSMG2Q969U7 264 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 ANKRD36BP1Q96IX9 119 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 NELL2Q99435 816 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 CBWD1Q9BRT8 395 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 DDX23Q9BUQ8 820 aaKnown RBP19.32■□□□□ 0.68
PNKP-225ENST00000636214 ZCWPW1Q9H0M4 648 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 ATXN3LQ9H3M9 355 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 HEBP1Q9NRV9 189 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 SPATA6Q9NWH7 488 aaPredicted RBP19.32■□□□□ 0.68
PNKP-225ENST00000636214 FAM13BQ9NYF5 915 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 ITGA11Q9UKX5 1188 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 AGAP1Q9UPQ3 857 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 USP34Q70CQ2 3546 aa19.32■□□□□ 0.68
PNKP-225ENST00000636214 VPS13AQ96RL7 3174 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 PRR23AA6NEV1 266 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 MAN2B1O00754 1011 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 VNN2O95498 520 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 F13A1P00488 732 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 ITGB3P05106 788 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 ZSCAN22P10073 491 aaPredicted RBP19.31■□□□□ 0.68
PNKP-225ENST00000636214 FCARP24071 287 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 GDI1P31150 447 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 BFSP1Q12934 665 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 SURF1Q15526 300 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 CSGALNACT2Q8N6G5 542 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 FGFBP2Q9BYJ0 223 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 TRIM9Q9C026 710 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 DNAJC25Q9H1X3 360 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 CRISPLD1Q9H336 500 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 KBTBD4Q9NVX7 518 aa19.31■□□□□ 0.68
PNKP-225ENST00000636214 ABI2Q9NYB9 513 aaPredicted RBP19.31■□□□□ 0.68
PNKP-225ENST00000636214 ZNF263O14978 683 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 LAMTOR5O43504 91 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 SOAT2O75908 522 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 TNNC2P02585 160 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 CDC25CP30307 473 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 VIPR2P41587 438 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 RBP5P82980 135 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 MYL7Q01449 175 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 ATL3Q6DD88 541 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 DNAJB7Q7Z6W7 309 aaPredicted RBP19.3■□□□□ 0.68
PNKP-225ENST00000636214 TTC9BQ8N6N2 239 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 LRRC52Q8N7C0 313 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 C1orf127Q8N9H9 656 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 CSGALNACT1Q8TDX6 532 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 ZSWIM3Q96MP5 696 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 SEMA4AQ9H3S1 761 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 DLGAP2Q9P1A6 1054 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 CFAP45Q9UL16 551 aa19.3■□□□□ 0.68
PNKP-225ENST00000636214 ZNF233A6NK53 670 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 HEPACAM2A8MVW5 462 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 EIF3DO15371 548 aaKnown RBP eCLIP19.29■□□□□ 0.68
PNKP-225ENST00000636214 LRRN2O75325 713 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 MOSPD3O75425 235 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 CD72P21854 359 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 GABRR2P28476 465 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 MYO1EQ12965 1108 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 E2F4Q16254 413 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 NFE2Q16621 373 aaPredicted RBP19.29■□□□□ 0.68
PNKP-225ENST00000636214 FAM26FQ5R3K3 315 aa19.29■□□□□ 0.68
PNKP-225ENST00000636214 VITQ6UXI7 678 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms