RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 IFRD1O00458 451 aaPredicted RBP6.26□□□□□ -1.41
SCN1A-212ENST00000636194 KPNA5O15131 536 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 SCGB2A1O75556 95 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 DCKP27707 260 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 DGKKQ5KSL6 1271 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 CHSY1Q86X52 802 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 OR8H2Q8N162 312 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF655Q8N720 491 aaPredicted RBP6.26□□□□□ -1.41
SCN1A-212ENST00000636194 CDK5RAP1Q96SZ6 601 aaKnown RBP6.26□□□□□ -1.41
SCN1A-212ENST00000636194 WWP1Q9H0M0 922 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 MFSD1Q9H3U5 465 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 EPB41L5Q9HCM4 733 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 CDC23Q9UJX2 597 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 ALG6Q9Y672 507 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 CDY2AQ9Y6F7 541 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 CDY1Q9Y6F8 540 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 CCDC188H7C350 402 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 AREL1O15033 823 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 RTN3O95197 1032 aaPredicted RBP6.26□□□□□ -1.41
SCN1A-212ENST00000636194 CD58P19256 250 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 MAGEA9P43362 315 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 MECP2P51608 486 aaKnown RBP6.26□□□□□ -1.41
SCN1A-212ENST00000636194 RBM6P78332 1123 aaKnown RBP6.26□□□□□ -1.41
SCN1A-212ENST00000636194 CYP27A1Q02318 531 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF846Q147U1 533 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 PTPAQ15257 358 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 OCLNQ16625 522 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 CACTIN-AS1Q8N1I8 211 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 RIN3Q8TB24 985 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 MCOLN3Q8TDD5 553 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 RUBCNQ92622 972 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 PTPRN2Q92932 1015 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 CNOT6LQ96LI5 555 aaKnown RBP6.26□□□□□ -1.41
SCN1A-212ENST00000636194 MAGEB10Q96LZ2 347 aaPredicted RBP6.26□□□□□ -1.41
SCN1A-212ENST00000636194 PUS7LQ9H0K6 701 aaKnown RBP6.26□□□□□ -1.41
SCN1A-212ENST00000636194 CRYL1Q9Y2S2 319 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 FLT1P17948 1338 aa6.26□□□□□ -1.41
SCN1A-212ENST00000636194 KLRF2D3W0D1 207 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 SORBS3O60504 671 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 CNOT3O75175 753 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 TADA2AO75478 443 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 HUNKP57058 714 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 TPI1P60174 286 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 PTPN12Q05209 780 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 DMPKQ09013 629 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 CCNIQ14094 377 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 CYP51A1Q16850 503 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 INTS11Q5TA45 600 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 TMEM35BQ8NCS4 154 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 PGBD4Q96DM1 585 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 GMCL1Q96IK5 515 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 CATSPERBQ9H7T0 1116 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 PHF11Q9UIL8 331 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ITGB1BP2Q9UKP3 347 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 RUVBL2Q9Y230 463 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ARL5AQ9Y689 179 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 SLC30A1Q9Y6M5 507 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 MAGEB3O15480 346 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 KCNK10P57789 538 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 PGBD2Q6P3X8 592 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 EMBQ6PCB8 327 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 EPHX4Q8IUS5 362 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF614Q8N883 585 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 SCFD2Q8WU76 684 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 FAM172AQ8WUF8 416 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ABCA1O95477 2261 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 FRMPD2Q68DX3 1309 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 IQCMA0A1B0GVH7 501 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 STX16-NPEPL1H3BU86 382 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 STX16O14662 325 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 VPS4BO75351 444 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 KRT34O76011 436 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 NUDT14O95848 222 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ATP5F1P24539 256 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 BCAR1P56945 870 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 NFX1Q12986 1120 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 KIZQ2M2Z5 673 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 TSHZ3Q63HK5 1081 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 HIBCHQ6NVY1 386 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 CHRDL2Q6WN34 429 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 KIAA0825Q8IV33 1275 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 IFNL3Q8IZI9 196 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ENKURQ8TC29 256 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 MED15Q96RN5 788 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 GPR63Q9BZJ6 419 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 HSPBP1Q9NZL4 362 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 CARNS1A5YM72 827 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 GGPS1O95749 300 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ATP8B2P98198 1209 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 BARGINQ6ZT62 677 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 TCEANC2Q96MN5 208 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 CFAP74Q9C0B2 1584 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ZFYVE9O95405 1425 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 SBNO1A3KN83 1393 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 STK36Q9NRP7 1315 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 UBE2QL1A1L167 161 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 G3V2T6 193 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 APBA3O96018 575 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 RB1P06400 928 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 VBP1P61758 197 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms