RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 YWHAHQ04917 246 aaPredicted RBP19.83■□□□□ 0.77
CLN6-212ENST00000636020 LMAN2Q12907 356 aa19.83■□□□□ 0.77
CLN6-212ENST00000636020 GPR17Q13304 367 aa19.83■□□□□ 0.77
CLN6-212ENST00000636020 USP39Q53GS9 565 aaKnown RBP19.83■□□□□ 0.77
CLN6-212ENST00000636020 TRIM68Q6AZZ1 485 aa19.83■□□□□ 0.77
CLN6-212ENST00000636020 CHCHD4Q8N4Q1 142 aa19.83■□□□□ 0.77
CLN6-212ENST00000636020 SLC46A2Q9BY10 475 aa19.83■□□□□ 0.77
CLN6-212ENST00000636020 OXCT2Q9BYC2 517 aaPredicted RBP19.83■□□□□ 0.77
CLN6-212ENST00000636020 CNTN3Q9P232 1028 aa19.83■□□□□ 0.77
CLN6-212ENST00000636020 GON4LQ3T8J9 2241 aa19.83■□□□□ 0.76
CLN6-212ENST00000636020 M0QZQ0 153 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 CPLX1O14810 134 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 CYP11B2P19099 503 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 BCKDHBP21953 392 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 SEMA3BQ13214 749 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 PPP2R5AQ15172 486 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 NAIF1Q69YI7 327 aaPredicted RBP19.82■□□□□ 0.76
CLN6-212ENST00000636020 ATAD1Q8NBU5 361 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 PIGKQ92643 395 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 EZH1Q92800 747 aaPredicted RBP19.82■□□□□ 0.76
CLN6-212ENST00000636020 ACDQ96AP0 544 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 IL21Q9HBE4 155 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 PTPRHQ9HD43 1115 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 TIMM13Q9Y5L4 95 aaPredicted RBP19.82■□□□□ 0.76
CLN6-212ENST00000636020 ASXL3Q9C0F0 2248 aa19.82■□□□□ 0.76
CLN6-212ENST00000636020 ACACAQ13085 2346 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 FAM205CA6NFA0 338 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 SOAT2O75908 522 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 ARSAP15289 507 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 RDXP35241 583 aaKnown RBP19.81■□□□□ 0.76
CLN6-212ENST00000636020 MAPK8P45983 427 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 DHPSP49366 369 aaPredicted RBP19.81■□□□□ 0.76
CLN6-212ENST00000636020 SCAPQ12770 1279 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 CALCRLQ16602 461 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 TRIM61Q5EBN2 209 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 PADI6Q6TGC4 694 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 RAB44Q7Z6P3 723 aaPredicted RBP19.81■□□□□ 0.76
CLN6-212ENST00000636020 ITIH5Q86UX2 942 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 TTC9BQ8N6N2 239 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 ACAP3Q96P50 834 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 NACC1Q96RE7 527 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 P2RY13Q9BPV8 354 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 NUSAP1Q9BXS6 441 aaKnown RBP19.81■□□□□ 0.76
CLN6-212ENST00000636020 TPSD1Q9BZJ3 242 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 TBX20Q9UMR3 447 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 PI4KAP42356 2102 aa19.81■□□□□ 0.76
CLN6-212ENST00000636020 MAST4O15021 2626 aa19.8■□□□□ 0.76
CLN6-212ENST00000636020 OR6C75A6NL08 312 aa19.8■□□□□ 0.76
CLN6-212ENST00000636020 U2AF2P26368 475 aaKnown RBP eCLIP19.8■□□□□ 0.76
CLN6-212ENST00000636020 TXKP42681 527 aa19.8■□□□□ 0.76
CLN6-212ENST00000636020 CATSPER3Q86XQ3 398 aa19.8■□□□□ 0.76
CLN6-212ENST00000636020 CMTM8Q8IZV2 173 aa19.8■□□□□ 0.76
CLN6-212ENST00000636020 TSTD1Q8NFU3 115 aa19.8■□□□□ 0.76
CLN6-212ENST00000636020 ACO2Q99798 780 aaKnown RBP19.8■□□□□ 0.76
CLN6-212ENST00000636020 GJB4Q9NTQ9 266 aa19.8■□□□□ 0.76
CLN6-212ENST00000636020 MTMR11A4FU01 709 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 K7ERI5 159 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 SEC24BO95487 1268 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 ENGP17813 658 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 CDC25CP30307 473 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 FAM193AP78312 1265 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 TOB2Q14106 344 aaPredicted RBP19.79■□□□□ 0.76
CLN6-212ENST00000636020 ZNF568Q3ZCX4 644 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 RASSF3Q86WH2 238 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 IFT74Q96LB3 600 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 POLD4Q9HCU8 107 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 TUFT1Q9NNX1 390 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 CCL26Q9Y258 94 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 CITO14578 2027 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 APC2O95996 2303 aa19.79■□□□□ 0.76
CLN6-212ENST00000636020 MED24O75448 989 aa19.78■□□□□ 0.76
CLN6-212ENST00000636020 GJA4P35212 333 aa19.78■□□□□ 0.76
CLN6-212ENST00000636020 MYBPC2Q14324 1141 aa19.78■□□□□ 0.76
CLN6-212ENST00000636020 ZNF423Q2M1K9 1284 aa19.78■□□□□ 0.76
CLN6-212ENST00000636020 CPLX2Q6PUV4 134 aaKnown RBP19.78■□□□□ 0.76
CLN6-212ENST00000636020 EXOC4Q96A65 974 aa19.78■□□□□ 0.76
CLN6-212ENST00000636020 ZNF274Q96GC6 653 aaPredicted RBP19.78■□□□□ 0.76
CLN6-212ENST00000636020 MTMR9Q96QG7 549 aa19.78■□□□□ 0.76
CLN6-212ENST00000636020 LPIN3Q9BQK8 851 aa19.78■□□□□ 0.76
CLN6-212ENST00000636020 HSFX1Q9UBD0 423 aa19.78■□□□□ 0.76
CLN6-212ENST00000636020 ZMYM5Q9UJ78 669 aa19.78■□□□□ 0.76
CLN6-212ENST00000636020 ARHGEF35A5YM69 484 aa19.77■□□□□ 0.76
CLN6-212ENST00000636020 HSPA4P34932 840 aa19.77■□□□□ 0.76
CLN6-212ENST00000636020 AARSP49588 968 aaKnown RBP eCLIP19.77■□□□□ 0.76
CLN6-212ENST00000636020 BMP2KLQ5H9B9 411 aa19.77■□□□□ 0.76
CLN6-212ENST00000636020 TMEM130Q8N3G9 435 aa19.77■□□□□ 0.76
CLN6-212ENST00000636020 RIN3Q8TB24 985 aa19.77■□□□□ 0.76
CLN6-212ENST00000636020 ADAM32Q8TC27 787 aa19.77■□□□□ 0.76
CLN6-212ENST00000636020 USP13Q92995 863 aaPredicted RBP19.77■□□□□ 0.76
CLN6-212ENST00000636020 CNOT6LQ96LI5 555 aaKnown RBP19.77■□□□□ 0.76
CLN6-212ENST00000636020 GCNAQ96QF7 691 aa19.77■□□□□ 0.76
CLN6-212ENST00000636020 TMEM74BQ9NUR3 256 aa19.77■□□□□ 0.76
CLN6-212ENST00000636020 TUBGCP4Q9UGJ1 667 aa19.77■□□□□ 0.76
CLN6-212ENST00000636020 MYO16Q9Y6X6 1858 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 EIF4E1BA6NMX2 242 aaKnown RBP19.76■□□□□ 0.75
CLN6-212ENST00000636020 ABLIM1O14639 778 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 TNFRSF10BO14763 440 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 LARGE1O95461 756 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 MCF2P10911 925 aa19.76■□□□□ 0.75
CLN6-212ENST00000636020 PSMA5P28066 241 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms