RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 EIF2AQ9BY44 585 aaKnown RBP16.51■□□□□ 0.23
CLN8-209ENST00000635970 CHST12Q9NRB3 414 aa16.51■□□□□ 0.23
CLN8-209ENST00000635970 CEP104O60308 925 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 MYOGP15173 224 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 CASP5P51878 434 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 ADAM9Q13443 819 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 PCBP1Q15365 356 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLN8-209ENST00000635970 FAM187BQ17R55 369 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 UBXN11Q5T124 520 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 SLC24A5Q71RS6 500 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 IRF2BP2Q7Z5L9 587 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 GLIS3Q8NEA6 775 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 KCTD10Q9H3F6 313 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 CXorf56Q9H5V9 222 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 PPANQ9NQ55 473 aaKnown RBP16.5■□□□□ 0.23
CLN8-209ENST00000635970 KIAA1671Q9BY89 1806 aa16.5■□□□□ 0.23
CLN8-209ENST00000635970 TULP1O00294 542 aaPredicted RBP16.49■□□□□ 0.23
CLN8-209ENST00000635970 ACKR2O00590 384 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 GJB5O95377 273 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 KCNH2Q12809 1159 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 LRIT3Q3SXY7 679 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 ODF2Q5BJF6 829 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 NOTUMQ6P988 496 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 CROCCP2Q86T23 111 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 FMNL3Q8IVF7 1028 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 CACNA2D3Q8IZS8 1091 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 CRIPAKQ8N1N5 446 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 RNF169Q8NCN4 708 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 CCDC114Q96M63 670 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 PBX4Q9BYU1 374 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 PDZD7Q9H5P4 517 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 TMEM134Q9H6X4 195 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 C1orf112Q9NSG2 853 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 NAGPAQ9UK23 515 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.49■□□□□ 0.23
CLN8-209ENST00000635970 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.49■□□□□ 0.23
CLN8-209ENST00000635970 MEIS3P2A8K0S8 358 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 ATF7P17544 494 aaPredicted RBP16.49■□□□□ 0.23
CLN8-209ENST00000635970 GAP43P17677 238 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 HPDP32754 393 aaPredicted RBP16.49■□□□□ 0.23
CLN8-209ENST00000635970 GATMP50440 423 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 PTK2Q05397 1052 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 UAP1Q16222 522 aaPredicted RBP16.49■□□□□ 0.23
CLN8-209ENST00000635970 TMEM132AQ24JP5 1023 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 HABP4Q5JVS0 413 aaKnown RBP16.49■□□□□ 0.23
CLN8-209ENST00000635970 GKAP1Q5VSY0 366 aaPredicted RBP16.49■□□□□ 0.23
CLN8-209ENST00000635970 EEF1DP3Q658K8 133 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 TPCN2Q8NHX9 752 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 PHOSPHO2Q8TCD6 241 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 SPAG5Q96R06 1193 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 TARS2Q9BW92 718 aaKnown RBP16.49■□□□□ 0.23
CLN8-209ENST00000635970 RAB17Q9H0T7 212 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 IKZF4Q9H2S9 585 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 KDM4CQ9H3R0 1056 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 FAM105AQ9NUU6 356 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 SEL1LQ9UBV2 794 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 PACSIN2Q9UNF0 486 aaPredicted RBP16.49■□□□□ 0.23
CLN8-209ENST00000635970 TRAF3IP3Q9Y228 551 aa16.49■□□□□ 0.23
CLN8-209ENST00000635970 UTP11Q9Y3A2 253 aaKnown RBP16.49■□□□□ 0.23
CLN8-209ENST00000635970 NLRC5Q86WI3 1866 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 A0A1B0GUA9 196 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 LCHNA4D1U4 455 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 KRIT1O00522 736 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 AXLP30530 894 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 PREPLQ4J6C6 727 aaPredicted RBP16.48■□□□□ 0.23
CLN8-209ENST00000635970 WLSQ5T9L3 541 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 ALKBH5Q6P6C2 394 aaKnown RBP16.48■□□□□ 0.23
CLN8-209ENST00000635970 ZNF720Q7Z2F6 126 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 PEX26Q7Z412 305 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 ECHDC2Q86YB7 292 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 LPPQ93052 612 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 LRCH3Q96II8 777 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 NAP1L3Q99457 506 aaPredicted RBP16.48■□□□□ 0.23
CLN8-209ENST00000635970 ZBED2Q9BTP6 218 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 PACSIN1Q9BY11 444 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 METTL14Q9HCE5 456 aaKnown RBP16.48■□□□□ 0.23
CLN8-209ENST00000635970 SLC40A1Q9NP59 571 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 OLFML3Q9NRN5 406 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 TBX20Q9UMR3 447 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 NENFQ9UMX5 172 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 YBX2Q9Y2T7 364 aaKnown RBP16.48■□□□□ 0.23
CLN8-209ENST00000635970 HES2Q9Y543 173 aa16.48■□□□□ 0.23
CLN8-209ENST00000635970 A0A0U1RQF3 1178 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 KIF1CO43896 1103 aaKnown RBP16.47■□□□□ 0.23
CLN8-209ENST00000635970 GCNT3O95395 438 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 NPTXRO95502 500 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 AFPP02771 609 aaKnown RBP16.47■□□□□ 0.23
CLN8-209ENST00000635970 FGFR1P11362 822 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 UCHL3P15374 230 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 DNA2P51530 1060 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 KCNA1Q09470 495 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 STRN3Q13033 797 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 ATF7IP2Q5U623 682 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 HOOK3Q86VS8 718 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 NPAS4Q8IUM7 802 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 SCFD1Q8WVM8 642 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 SEC16BQ96JE7 1060 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 KCNG1Q9UIX4 513 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 STXBP5LQ9Y2K9 1186 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 PCDHB2Q9Y5E7 798 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms